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Prediction of amphipathic helix-membrane interactions with Rosetta

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008818

2021

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Silent agonists for α7 nicotinic acetylcholine receptors

Pharmacological research, 2023-04, Vol.190, p.106736-106736, Article 106736

2023

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An Investigation of Three-Finger Toxin-nAChR Interactions through Rosetta Protein Docking

Toxins, 2020-09, Vol.12 (9), p.598

2020

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Template-free prediction of a new monotopic membrane protein fold and assembly by AlphaFold2

Biophysical journal, 2023-06, Vol.122 (11), p.2041-2052

2023

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In Silico Modeling of the α7 Nicotinic Acetylcholine Receptor: New Pharmacological Challenges Associated with Multiple Modes of Signaling

Mini reviews in medicinal chemistry, 2020, Vol.20 (10), p.841

2020

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Nicotinic receptor pharmacology in silico: Insights and challenges

Neuropharmacology, 2020-10, Vol.177, p.108257-108257, Article 108257

Gulsevin, Alican

2020

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Veratridine Can Bind to a Site at the Mouth of the Channel Pore at Human Cardiac Sodium Channel NaV1.5

International journal of molecular sciences, 2022-02, Vol.23 (4), p.2225

2022

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Prediction of amphipathic helix-membrane interactions with Rosetta

Biophysical journal, 2022-02, Vol.121 (3), p.135a-135a

2022

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The Allosteric Activation of α7 nAChR by α-Conotoxin MrIC Is Modified by Mutations at the Vestibular Site

Toxins, 2021-08, Vol.13 (8), p.555

2021

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Prediction of Amphipathic Helix - Membrane Interactions with Rosetta

Biophysical journal, 2021-02, Vol.120 (3), p.19a-19a

2021

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Benchmarking AlphaFold2 on peptide structure prediction

Structure (London), 2023-01, Vol.31 (1), p.111-119.e2

2023

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A Computational Analysis of the Factors Governing the Dynamics of α7 nAChR and Its Homologs

Biophysical journal, 2020-10, Vol.119 (8), p.1656-1669

2020

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Template-free prediction of a new monotopic membrane protein fold and oligomeric assembly by AlphaFold2

Biophysical journal, 2023-02, Vol.122 (3), p.194a-194a

2023

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Allosteric Agonism of α 7 Nicotinic Acetylcholine Receptors: Receptor Modulation Outside the Orthosteric Site

Molecular pharmacology, 2019-06, Vol.95 (6), p.606-614

2019

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The novel non-hallucinogenic compound DM506 (3-methyl-1,2,3,4,5,6-hexahydroazepino[4,5-b]indole) induces sedative- and anxiolytic-like activity in mice by a mechanism involving 5-HT2A receptor activation

European journal of pharmacology, 2024-03, Vol.966, p.176329-176329, Article 176329

2024

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The building blocks of caveolae, revealed

Biophysical journal, 2022-02, Vol.121 (3), p.2a-2a

2022

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Macroscopic and Microscopic Activation of α 7 Nicotinic Acetylcholine Receptors by the Structurally Unrelated Allosteric Agonist-Positive Allosteric Modulators (ago-PAMs) B-973B and GAT107

Molecular pharmacology, 2019-01, Vol.95 (1), p.43-61

2019

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Structural analysis of the P132L disease mutation in caveolin-1 reveals its role in the assembly of oligomeric complexes

The Journal of biological chemistry, 2023-04, Vol.299 (4), p.104574-104574, Article 104574

2023

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Undiagnosed Disease Network collaborative approach in diagnosing rare disease in a patient with a mosaic CACNA1D variant

American journal of medical genetics. Part A, 2024-03, p.e63597

2024

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Molecular architecture of the human caveolin-1 complex

Science advances, 2022-05, Vol.8 (19), p.eabn7232-eabn7232

2022

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Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design

Biochemistry (Easton), 2021-03, Vol.60 (11), p.825-846

2021

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Probable digenic inheritance of Diamond–Blackfan anemia

American journal of medical genetics. Part A, 2024-03, Vol.194 (3), p.e63454-n/a

2024

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Allosteric Agonism of α7 Nicotinic Acetylcholine Receptors: Receptor Modulation Outside the Orthosteric Site

Molecular pharmacology, 2019-06, Vol.95 (6), p.606-614

2019

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Macroscopic and Microscopic Activation of α7 Nicotinic Acetylcholine Receptors by the Structurally Unrelated Allosteric Agonist-Positive Allosteric Modulators (ago-PAMs) B-973B and GAT107

Molecular pharmacology, 2019-01, Vol.95 (1), p.43-61

2019

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Veratridine Can Bind to a Site at the Mouth of the Channel Pore at Human Cardiac Sodium Channel Na V 1.5

International journal of molecular sciences, 2022-02, Vol.23 (4)

2022

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Prediction of amphipathic helix-membrane interactions with Rosetta

Silent agonists for α7 nicotinic acetylcholine receptors

An Investigation of Three-Finger Toxin-nAChR Interactions through Rosetta Protein Docking

Template-free prediction of a new monotopic membrane protein fold and assembly by AlphaFold2

In Silico Modeling of the α7 Nicotinic Acetylcholine Receptor: New Pharmacological Challenges Associated with Multiple Modes of Signaling

Nicotinic receptor pharmacology in silico: Insights and challenges

Veratridine Can Bind to a Site at the Mouth of the Channel Pore at Human Cardiac Sodium Channel NaV1.5

Prediction of amphipathic helix-membrane interactions with Rosetta

The Allosteric Activation of α7 nAChR by α-Conotoxin MrIC Is Modified by Mutations at the Vestibular Site

Prediction of Amphipathic Helix - Membrane Interactions with Rosetta

Benchmarking AlphaFold2 on peptide structure prediction

A Computational Analysis of the Factors Governing the Dynamics of α7 nAChR and Its Homologs

Template-free prediction of a new monotopic membrane protein fold and oligomeric assembly by AlphaFold2

Allosteric Agonism of α 7 Nicotinic Acetylcholine Receptors: Receptor Modulation Outside the Orthosteric Site

The novel non-hallucinogenic compound DM506 (3-methyl-1,2,3,4,5,6-hexahydroazepino[4,5-b]indole) induces sedative- and anxiolytic-like activity in mice by a mechanism involving 5-HT2A receptor activation

The building blocks of caveolae, revealed

Macroscopic and Microscopic Activation of α 7 Nicotinic Acetylcholine Receptors by the Structurally Unrelated Allosteric Agonist-Positive Allosteric Modulators (ago-PAMs) B-973B and GAT107

Structural analysis of the P132L disease mutation in caveolin-1 reveals its role in the assembly of oligomeric complexes

Undiagnosed Disease Network collaborative approach in diagnosing rare disease in a patient with a mosaic CACNA1D variant

Molecular architecture of the human caveolin-1 complex

Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design

Probable digenic inheritance of Diamond–Blackfan anemia

Allosteric Agonism of α7 Nicotinic Acetylcholine Receptors: Receptor Modulation Outside the Orthosteric Site

Macroscopic and Microscopic Activation of α7 Nicotinic Acetylcholine Receptors by the Structurally Unrelated Allosteric Agonist-Positive Allosteric Modulators (ago-PAMs) B-973B and GAT107

Veratridine Can Bind to a Site at the Mouth of the Channel Pore at Human Cardiac Sodium Channel Na V 1.5

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