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3′ end additions by T7 RNA polymerase are RNA self-templated, distributive and diverse in character—RNA-Seq analyses

Nucleic acids research, 2018-10, Vol.46 (18), p.9253-9263

2018

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Triggering of RNA Interference with RNA–RNA, RNA–DNA, and DNA–RNA Nanoparticles

ACS nano, 2015-01, Vol.9 (1), p.251-259

2015

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Computational Non-Coding RNA Biology

Computational Non-Coding RNA Biology, 2018

Zheng, Yun

1, 2018

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RNA Structure and Function

Barciszewski, Jan

1, 2023

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Beyond microRNA – Novel RNAs derived from small non-coding RNA and their implication in cancer

Cancer letters, 2013-11, Vol.340 (2), p.201-211

2013

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Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase

Science (American Association for the Advancement of Science), 2019-01, Vol.363 (6423)

2019

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Evolution of transient RNA structure–RNA polymerase interactions in respiratory RNA virus genomes

Virus evolution, 2023-12, Vol.9 (2), p.vead056-vead056

2023

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Template requirements of Zika RNA polymerase during in vitro RNA synthesis from the 3′-end of virus minus-strand RNA

Biochimie, 2022-04, Vol.195, p.71-76

2022

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Structure of replicating SARS-CoV-2 polymerase

Nature (London), 2020-08, Vol.584 (7819), p.154-156

2020

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Profiling expression of coding genes, long noncoding RNA, and circular RNA in lung adenocarcinoma by ribosomal RNA‐depleted RNA sequencing

FEBS open bio, 2018-04, Vol.8 (4), p.544-555

2018

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RIC-seq for global in situ profiling of RNA-RNA spatial interactions

Nature (London), 2020-06, Vol.582 (7812), p.432-437

2020

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The DExD box ATPase DDX55 is recruited to domain IV of the 28S ribosomal RNA by its C-terminal region

RNA biology, 2021-08, Vol.18 (8), p.1124-1135

2021

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A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis

Molecular cell, 2017-04, Vol.66 (2), p.270-284.e13

2017

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Structure of the RNA-dependent RNA polymerase from COVID-19 virus

Science (American Association for the Advancement of Science), 2020-05, Vol.368 (6492), p.779-782

2020

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Structural basis for inhibition of the RNA-dependent RNA polymerase from SARS-CoV-2 by remdesivir

Science (American Association for the Advancement of Science), 2020-06, Vol.368 (6498), p.1499-1504

2020

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Cooperative recruitment of RDR6 by SGS3 and SDE5 during small interfering RNA amplification in Arabidopsis

Proceedings of the National Academy of Sciences - PNAS, 2021-08, Vol.118 (34), p.1

2021

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Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection

The Plant cell, 2010-02, Vol.22 (2), p.481-496

2010

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Effects of natural RNA modifications on the activity of SARS‐CoV‐2 RNA‐dependent RNA polymerase

The FEBS journal, 2023-01, Vol.290 (1), p.80-92

2023

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Drosophila hairpin RNA pathway generates endogenous short interfering RNAs

Nature, 2008-06, Vol.453 (7196), p.803-806

2008

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Plant Extracellular Vesicles Contain Diverse Small RNA Species and Are Enriched in 10- to 17-Nucleotide "Tiny" RNAs

The Plant cell, 2019-02, Vol.31 (2), p.315-324

2019

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MicroRNA Methods

Rossi, John J

1, 2007

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The human RNA kinase hClp1 is active on 3' transfer RNA exons and short interfering RNAs

Nature, 2007-05, Vol.447 (7141), p.222-226

2007

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Transcriptome-wide discovery of circular RNAs in Archaea

Nucleic acids research, 2012-04, Vol.40 (7), p.3131-3142

2012

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Distinct Populations of Primary and Secondary Effectors During RNAi in C. elegans

Science (American Association for the Advancement of Science), 2007-01, Vol.315 (5809), p.241-244

2007

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Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast

Proceedings of the National Academy of Sciences - PNAS, 2011-06, Vol.108 (24), p.10010-10015

2011

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3′ end additions by T7 RNA polymerase are RNA self-templated, distributive and diverse in character—RNA-Seq analyses

Triggering of RNA Interference with RNA–RNA, RNA–DNA, and DNA–RNA Nanoparticles

Computational Non-Coding RNA Biology

RNA Structure and Function

Beyond microRNA – Novel RNAs derived from small non-coding RNA and their implication in cancer

Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase

Evolution of transient RNA structure–RNA polymerase interactions in respiratory RNA virus genomes

Template requirements of Zika RNA polymerase during in vitro RNA synthesis from the 3′-end of virus minus-strand RNA

Structure of replicating SARS-CoV-2 polymerase

Profiling expression of coding genes, long noncoding RNA, and circular RNA in lung adenocarcinoma by ribosomal RNA‐depleted RNA sequencing

RIC-seq for global in situ profiling of RNA-RNA spatial interactions

The DExD box ATPase DDX55 is recruited to domain IV of the 28S ribosomal RNA by its C-terminal region

A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis

Structure of the RNA-dependent RNA polymerase from COVID-19 virus

Structural basis for inhibition of the RNA-dependent RNA polymerase from SARS-CoV-2 by remdesivir

Cooperative recruitment of RDR6 by SGS3 and SDE5 during small interfering RNA amplification in Arabidopsis

Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection

Effects of natural RNA modifications on the activity of SARS‐CoV‐2 RNA‐dependent RNA polymerase

Drosophila hairpin RNA pathway generates endogenous short interfering RNAs

Plant Extracellular Vesicles Contain Diverse Small RNA Species and Are Enriched in 10- to 17-Nucleotide "Tiny" RNAs

MicroRNA Methods

The human RNA kinase hClp1 is active on 3' transfer RNA exons and short interfering RNAs

Transcriptome-wide discovery of circular RNAs in Archaea

Distinct Populations of Primary and Secondary Effectors During RNAi in C. elegans

Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast

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