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Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

Nature communications, 2016-04, Vol.7 (1), p.11220-11220, Article 11220

2016

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A mass spectrometric-derived cell surface protein atlas

PloS one, 2015-04, Vol.10 (3), p.e0121314-e0121314

2015

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A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli

The Journal of biological chemistry, 2016-01, Vol.291 (4), p.1921-1932

2016

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Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

Genome research, 2013-11, Vol.23 (11), p.1916

2013

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Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation

BMC genomics, 2016-04, Vol.17 (289), p.302-302, Article 302

2016

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Response of Burkholderia cenocepacia H111 to micro-oxia

PloS one, 2013-09, Vol.8 (9), p.e72939-e72939

2013

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The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111

PloS one, 2012-11, Vol.7 (11), p.e49966-e49966

2012

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The hemolymph proteome of fed and starved Drosophila larvae

PloS one, 2013-06, Vol.8 (6), p.e67208-e67208

2013

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Proteomics Analysis of Psychotria Leaf Nodule Symbiosis: Improved Genome Annotation and Metabolic Predictions

Molecular plant-microbe interactions, 2013-11, Vol.26 (11), p.1325-1333

2013

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A comparative approach linking molecular dynamics of altered peptide ligands and MHC with in vivo immune responses

PloS one, 2010-07, Vol.5 (7), p.e11653

2010

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Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism

Journal of proteomics, 2014-03, Vol.99 (C), p.123-137

2014

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Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data

Journal of proteomics, 2014-08, Vol.108, p.269-283

2014

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A critical cross-validation of high throughput structural binding prediction methods for pMHC

Journal of computer-aided molecular design, 2009-05, Vol.23 (5), p.301-307

2009

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Protter: interactive protein feature visualization and integration with experimental proteomic data

Bioinformatics, 2014-03, Vol.30 (6), p.884-886

2014

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A link between arabinose utilization and oxalotrophy in Bradyrhizobium japonicum

Applied and Environmental Microbiology, 2014-04, Vol.80 (7), p.2094-2101

2014

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vmdICE: A plug-in for rapid evaluation of molecular dynamics simulations using VMD

Journal of computational chemistry, 2010-12, Vol.31 (16), p.2868-2873

2010

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Combine and Conquer: Surfactants, Solvents, and Chaotropes for Robust Mass Spectrometry Based Analyses of Membrane Proteins

Analytical chemistry (Washington), 2014-02, Vol.86 (3), p.1551-1559

2014

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Side chain substitution benchmark for peptide/MHC interaction

Protein science, 2008-06, Vol.17 (6), p.977-982

2008

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The expansion of the metazoan microRNA repertoire

BMC genomics, 2006-02, Vol.7 (1), p.25-25, Article 25

2006

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3-Layer-based analysis of peptide–MHC interaction: In silico prediction, peptide binding affinity and T cell activation in a relevant allergen-specific model

Molecular immunology, 2009-05, Vol.46 (8), p.1839-1844

2009

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σ 54 -Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

Applied and Environmental Microbiology, 2015-06, Vol.81 (12), p.4077-4089

2015

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σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

Applied and environmental microbiology, 2015-06, Vol.81 (12), p.4077-4089

2015

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[sigma]^sup 54^-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

Applied and environmental microbiology, 2015-06, Vol.81 (12), p.4077

2015

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Surfaceome of classical Hodgkin and non-Hodgkin lymphoma

Proteomics. Clinical applications, 2015-08, Vol.9 (7-8), p.661-670

2015

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Quantitative proteomic analysis of Shigella flexneri and Shigella sonnei Generalized Modules for Membrane Antigens (GMMA) reveals highly pure preparations

International journal of medical microbiology, 2016-02, Vol.306 (2), p.99-108

2016

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Explosive cell lysis as a mechanism for the biogenesis of bacterial membrane vesicles and biofilms

A mass spectrometric-derived cell surface protein atlas

A Peptidomimetic Antibiotic Targets Outer Membrane Proteins and Disrupts Selectively the Outer Membrane in Escherichia coli

Directed shotgun proteomics guided by saturated RNA-seq identifies a complete expressed prokaryotic proteome

Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation

Response of Burkholderia cenocepacia H111 to micro-oxia

The AHL- and BDSF-dependent quorum sensing systems control specific and overlapping sets of genes in Burkholderia cenocepacia H111

The hemolymph proteome of fed and starved Drosophila larvae

Proteomics Analysis of Psychotria Leaf Nodule Symbiosis: Improved Genome Annotation and Metabolic Predictions

A comparative approach linking molecular dynamics of altered peptide ligands and MHC with in vivo immune responses

Proteome-wide identification of predominant subcellular protein localizations in a bacterial model organism

Improved prediction of peptide detectability for targeted proteomics using a rank-based algorithm and organism-specific data

A critical cross-validation of high throughput structural binding prediction methods for pMHC

Protter: interactive protein feature visualization and integration with experimental proteomic data

A link between arabinose utilization and oxalotrophy in Bradyrhizobium japonicum

vmdICE: A plug-in for rapid evaluation of molecular dynamics simulations using VMD

Combine and Conquer: Surfactants, Solvents, and Chaotropes for Robust Mass Spectrometry Based Analyses of Membrane Proteins

Side chain substitution benchmark for peptide/MHC interaction

The expansion of the metazoan microRNA repertoire

3-Layer-based analysis of peptide–MHC interaction: In silico prediction, peptide binding affinity and T cell activation in a relevant allergen-specific model

σ 54 -Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

σ54-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

[sigma]^sup 54^-Dependent Response to Nitrogen Limitation and Virulence in Burkholderia cenocepacia Strain H111

Surfaceome of classical Hodgkin and non-Hodgkin lymphoma

Quantitative proteomic analysis of Shigella flexneri and Shigella sonnei Generalized Modules for Membrane Antigens (GMMA) reveals highly pure preparations

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