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Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir

PLoS pathogens, 2017-03, Vol.13 (3), p.e1006283-e1006283

2017

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Large number of rebounding/founder HIV variants emerge from multifocal infection in lymphatic tissues after treatment interruption

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (10), p.E1126-E1134

2015

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Generation of Transmitted/Founder HIV-1 Infectious Molecular Clones and Characterization of Their Replication Capacity in CD4 T Lymphocytes and Monocyte-Derived Macrophages

Journal of Virology, 2012-03, Vol.86 (5), p.2715-2728

2012

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HIV-1 Vpu Mediates HLA-C Downregulation

Cell host & microbe, 2016-05, Vol.19 (5), p.686-695

2016

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Site-Specific Glycosylation of Virion-Derived HIV-1 Env Is Mimicked by a Soluble Trimeric Immunogen

Cell reports (Cambridge), 2018-08, Vol.24 (8), p.1958-1966.e5

2018

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Barriers to mucosal transmission of immunodeficiency viruses

Blood, 2011-07, Vol.118 (4), p.839-846

2011

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Minimal Contribution of APOBEC3-Induced G-to-A Hypermutation to HIV-1 Recombination and Genetic Variation

PLoS pathogens, 2016-05, Vol.12 (5), p.e1005646

2016

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Limited or no protection by weakly or nonneutralizing antibodies against vaginal SHIV challenge of macaques compared with a strongly neutralizing antibody

Proceedings of the National Academy of Sciences - PNAS, 2011-07, Vol.108 (27), p.11181-11186

2011

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HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC

PLoS pathogens, 2009-05, Vol.5 (5), p.e1000414-e1000414

2009

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African green monkeys avoid SIV disease progression by preventing intestinal dysfunction and maintaining mucosal barrier integrity

PLoS pathogens, 2020-03, Vol.16 (3), p.e1008333-e1008333

2020

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Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

Nature communications, 2018-05, Vol.9 (1), p.1928-15, Article 1928

2018

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Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

Journal of Virology, 2008-04, Vol.82 (8), p.3952-3970

2008

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Inflammatory genital infections mitigate a severe genetic bottleneck in heterosexual transmission of subtype A and C HIV-1

PLoS pathogens, 2009-01, Vol.5 (1), p.e1000274-e1000274

2009

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Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains

Cell host & microbe, 2009-11, Vol.6 (5), p.409-421

2009

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Antibodies with High Avidity to the gp120 Envelope Protein in Protection from Simian Immunodeficiency Virus SIVmac251 Acquisition in an Immunization Regimen That Mimics the RV-144 Thai Trial

Journal of Virology, 2013-02, Vol.87 (3), p.1708-1719

2013

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Timing of initiation of anti-retroviral therapy predicts post-treatment control of SIV replication

PLoS pathogens, 2023-10, Vol.19 (10), p.e1011660-e1011660

2023

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TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

Nature communications, 2024-02, Vol.15 (1), p.1348-1348

2024

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Transient viral replication during analytical treatment interruptions in SIV infected macaques can alter the rebound-competent viral reservoir

PLoS pathogens, 2021-06, Vol.17 (6), p.e1009686-e1009686

2021

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Preferential selection of viral escape mutants by CD8+ T cell 'sieving' of SIV reactivation from latency

PLoS pathogens, 2023-11, Vol.19 (11), p.e1011755-e1011755

2023

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Hypercytotoxicity and rapid loss of NKp44+ innate lymphoid cells during acute SIV infection

PLoS pathogens, 2014-12, Vol.10 (12), p.e1004551

2014

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Wide Variation in the Multiplicity of HIV-1 Infection among Injection Drug Users

Journal of Virology, 2010-06, Vol.84 (12), p.6241-6247

2010

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Genetically barcoded SIV reveals the emergence of escape mutations in multiple viral lineages during immune escape

Proceedings of the National Academy of Sciences - PNAS, 2020-01, Vol.117 (1), p.494-502

2020

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Short Communication: Comparative Evaluation of Coformulated Injectable Combination Antiretroviral Therapy Regimens in Simian Immunodeficiency Virus-Infected Rhesus Macaques

AIDS research and human retroviruses, 2016-02, Vol.32 (2), p.163

2016

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Proviruses with identical sequences comprise a large fraction of the replication-competent HIV reservoir

Large number of rebounding/founder HIV variants emerge from multifocal infection in lymphatic tissues after treatment interruption

Generation of Transmitted/Founder HIV-1 Infectious Molecular Clones and Characterization of Their Replication Capacity in CD4 T Lymphocytes and Monocyte-Derived Macrophages

Genetically-barcoded SIV facilitates enumeration of rebound variants and estimation of reactivation rates in nonhuman primates following interruption of suppressive antiretroviral therapy

HIV-1 Vpu Mediates HLA-C Downregulation

Site-Specific Glycosylation of Virion-Derived HIV-1 Env Is Mimicked by a Soluble Trimeric Immunogen

Barriers to mucosal transmission of immunodeficiency viruses

Minimal Contribution of APOBEC3-Induced G-to-A Hypermutation to HIV-1 Recombination and Genetic Variation

Limited or no protection by weakly or nonneutralizing antibodies against vaginal SHIV challenge of macaques compared with a strongly neutralizing antibody

HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC

African green monkeys avoid SIV disease progression by preventing intestinal dysfunction and maintaining mucosal barrier integrity

Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection

Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

Inflammatory genital infections mitigate a severe genetic bottleneck in heterosexual transmission of subtype A and C HIV-1

Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains

Antibodies with High Avidity to the gp120 Envelope Protein in Protection from Simian Immunodeficiency Virus SIVmac251 Acquisition in an Immunization Regimen That Mimics the RV-144 Thai Trial

Timing of initiation of anti-retroviral therapy predicts post-treatment control of SIV replication

Initial B-Cell Responses to Transmitted Human Immunodeficiency Virus Type 1: Virion-Binding Immunoglobulin M (IgM) and IgG Antibodies Followed by Plasma Anti-gp41 Antibodies with Ineffective Control of Initial Viremia

TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

Transient viral replication during analytical treatment interruptions in SIV infected macaques can alter the rebound-competent viral reservoir

Preferential selection of viral escape mutants by CD8+ T cell 'sieving' of SIV reactivation from latency

Hypercytotoxicity and rapid loss of NKp44+ innate lymphoid cells during acute SIV infection

Wide Variation in the Multiplicity of HIV-1 Infection among Injection Drug Users

Genetically barcoded SIV reveals the emergence of escape mutations in multiple viral lineages during immune escape

Short Communication: Comparative Evaluation of Coformulated Injectable Combination Antiretroviral Therapy Regimens in Simian Immunodeficiency Virus-Infected Rhesus Macaques

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