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Proteome Discoverer-A Community Enhanced Data Processing Suite for Protein Informatics

Proteomes, 2021-03, Vol.9 (1), p.15

Orsburn, Benjamin C

2021

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Evaluation of the Sensitivity of Proteomics Methods Using the Absolute Copy Number of Proteins in a Single Cell as a Metric

Proteomes, 2021-07, Vol.9 (3), p.34

Orsburn, Benjamin C

2021

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Beyond the model organism—Mechanistic analysis of protein post‐translational modifications is ready for all challengers

Proteomics (Weinheim), 2024-03, Vol.24 (5), p.e2300314-n/a

Orsburn, Benjamin C.

2024

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Metabolomic, Proteomic, and Single-Cell Proteomic Analysis of Cancer Cells Treated with the KRASG12D Inhibitor MRTX1133

Journal of proteome research, 2023-11, Vol.22 (12), p.3703-3713

Orsburn, Benjamin C

2023

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Characterization of a novel AraC/XylS-regulated family of N-acyltransferases in pathogens of the order Enterobacterales

PLoS pathogens, 2020-08, Vol.16 (8), p.e1008776

2020

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Metabolomic, Proteomic, and Single-Cell Proteomic Analysis of Cancer Cells Treated with the KRAS G12D Inhibitor MRTX1133

Journal of proteome research, 2023-12, Vol.22 (12), p.3703-3713

Orsburn, Benjamin C

2023

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The Open Pesticide Transition Library (oPestTL)

Journal of the American Society for Mass Spectrometry, 2022-10, Vol.33 (10), p.1813-1815

Orsburn, Benjamin C.

2022

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Cocaine regulates antiretroviral therapy CNS access through pregnane-x receptor-mediated drug transporter and metabolizing enzyme modulation at the blood brain barrier

Fluids and barriers of the CNS, 2024-01, Vol.21 (1), p.5-27, Article 5

2024

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Chorioamnionitis disrupts erythropoietin and melatonin homeostasis through the placental-fetal-brain axis during critical developmental periods

Frontiers in physiology, 2023-07, Vol.14, p.1201699

2023

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Standard Flow Multiplexed Proteomics (SFloMPro)-An Accessible Alternative to NanoFlow Based Shotgun Proteomics

Proteomes, 2022-01, Vol.10 (1), p.3

2022

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Gene expression profiling of 49 human tumor xenografts from in vitro culture through multiple in vivo passages--strategies for data mining in support of therapeutic studies

BMC genomics, 2014-05, Vol.15 (1), p.393-393

2014

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Biotransformation of Efavirenz and Proteomic Analysis of Cytochrome P450s and UDP-Glucuronosyltransferases in Mouse, Macaque, and Human Brain-Derived In Vitro Systems

Drug metabolism and disposition, 2023-04, Vol.51 (4), p.521-531

2023

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Visual Mass-Spec Share (vMS-Share): A New Public Web-Based Mass Spectrometry Visualization and Data Mining Repository

Journal of proteomics & bioinformatics, 2019, Vol.12 (2)

2019

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Sialylated keratan sulfates on MUC5B are Siglec-8 ligands in the human esophagus

Glycobiology (Oxford), 2024-08, Vol.34 (10)

2024

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Human brain sialoglycan ligand for CD33, a microglial inhibitory Siglec implicated in Alzheimer’s disease

The Journal of biological chemistry, 2022-06, Vol.298 (6), p.101960, Article 101960

2022

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Spatial Heterogeneity of Brain Lipids in SIV-Infected Macaques Treated with Antiretroviral Therapy

Journal of the American Society for Mass Spectrometry, 2024-02, Vol.35 (2), p.185-196

2024

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The Human Ganglioside Interactome in Live Cells Revealed Using Clickable Photoaffinity Ganglioside Probes

Journal of the American Chemical Society, 2024-07, Vol.146 (26), p.17801-17816

2024

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The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module

Biochimica et biophysica acta. Gene regulatory mechanisms, 2023-06, Vol.1866 (2), p.194929-194929, Article 194929

2023

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Increased Protein Insolubility in Brains From a Subset of Patients With Schizophrenia

The American journal of psychiatry, 2019-09, Vol.176 (9), p.730-743

2019

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EstG is a novel esterase required for cell envelope integrity in Caulobacter

Current biology, 2023-01, Vol.33 (2), p.228-240.e7

2023

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Cloud Computing Based Immunopeptidomics Utilizing Community Curated Variant Libraries Simplifies and Improves Neo-Antigen Discovery in Metastatic Melanoma

Cancers, 2021-07, Vol.13 (15), p.3754

2021

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Tenofovir Activation Is Diminished in the Brain and Liver of Creatine Kinase Brain-Type Knockout Mice

ACS pharmacology & translational science, 2024-01, Vol.7 (1), p.222-235

2024

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EtfA catalyses the formation of dipicolinic acid in Clostridium perfringens

Molecular microbiology, 2010-01, Vol.75 (1), p.178-186

2010

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Characterization of antipsychotic medications, amino acid signatures, and platelet-activating factor in first-episode psychosis

Biomarkers in neuropsychiatry, 2021-12, Vol.5, p.100045, Article 100045

2021

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Proteome Discoverer-A Community Enhanced Data Processing Suite for Protein Informatics

Evaluation of the Sensitivity of Proteomics Methods Using the Absolute Copy Number of Proteins in a Single Cell as a Metric

Beyond the model organism—Mechanistic analysis of protein post‐translational modifications is ready for all challengers

Metabolomic, Proteomic, and Single-Cell Proteomic Analysis of Cancer Cells Treated with the KRASG12D Inhibitor MRTX1133

Characterization of a novel AraC/XylS-regulated family of N-acyltransferases in pathogens of the order Enterobacterales

Metabolomic, Proteomic, and Single-Cell Proteomic Analysis of Cancer Cells Treated with the KRAS G12D Inhibitor MRTX1133

The Open Pesticide Transition Library (oPestTL)

Cocaine regulates antiretroviral therapy CNS access through pregnane-x receptor-mediated drug transporter and metabolizing enzyme modulation at the blood brain barrier

Chorioamnionitis disrupts erythropoietin and melatonin homeostasis through the placental-fetal-brain axis during critical developmental periods

Standard Flow Multiplexed Proteomics (SFloMPro)-An Accessible Alternative to NanoFlow Based Shotgun Proteomics

Gene expression profiling of 49 human tumor xenografts from in vitro culture through multiple in vivo passages--strategies for data mining in support of therapeutic studies

Biotransformation of Efavirenz and Proteomic Analysis of Cytochrome P450s and UDP-Glucuronosyltransferases in Mouse, Macaque, and Human Brain-Derived In Vitro Systems

Visual Mass-Spec Share (vMS-Share): A New Public Web-Based Mass Spectrometry Visualization and Data Mining Repository

Sialylated keratan sulfates on MUC5B are Siglec-8 ligands in the human esophagus

Human brain sialoglycan ligand for CD33, a microglial inhibitory Siglec implicated in Alzheimer’s disease

Spatial Heterogeneity of Brain Lipids in SIV-Infected Macaques Treated with Antiretroviral Therapy

The Human Ganglioside Interactome in Live Cells Revealed Using Clickable Photoaffinity Ganglioside Probes

The SAGA HAT module is tethered by its SWIRM domain and modulates activity of the SAGA DUB module

Increased Protein Insolubility in Brains From a Subset of Patients With Schizophrenia

EstG is a novel esterase required for cell envelope integrity in Caulobacter

Cloud Computing Based Immunopeptidomics Utilizing Community Curated Variant Libraries Simplifies and Improves Neo-Antigen Discovery in Metastatic Melanoma

Tenofovir Activation Is Diminished in the Brain and Liver of Creatine Kinase Brain-Type Knockout Mice

Reinspection of a Clinical Proteomics Tumor Analysis Consortium (CPTAC) Dataset with Cloud Computing Reveals Abundant Post-Translational Modifications and Protein Sequence Variants

EtfA catalyses the formation of dipicolinic acid in Clostridium perfringens

Characterization of antipsychotic medications, amino acid signatures, and platelet-activating factor in first-episode psychosis

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