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Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm

Genome Biology, 2016-08, Vol.17 (1), p.173-173, Article 173

2016

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A statistical approach for identifying differential distributions in single-cell RNA-seq experiments

Genome Biology, 2016-10, Vol.17 (1), p.222-222, Article 222

2016

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SCnorm: robust normalization of single-cell RNA-seq data

Nature methods, 2017-06, Vol.14 (6), p.584

2017

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Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis

Proceedings of the National Academy of Sciences - PNAS, 2013-09, Vol.110 (39), p.15644-15649

2013

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Network inference with Granger causality ensembles on single-cell transcriptomics

Cell reports (Cambridge), 2022-02, Vol.38 (6), p.110333-110333, Article 110333

2022

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A Novel Approach to Single Cell RNA‐Sequence Analysis Facilitates In Silico Gene Reporting of Human Pluripotent Stem Cell‐Derived Retinal Cell Types

Stem cells (Dayton, Ohio), 2018-03, Vol.36 (3), p.313-324

2018

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Trendy: segmented regression analysis of expression dynamics in high-throughput ordered profiling experiments

BMC bioinformatics, 2018-10, Vol.19 (1), p.380-380, Article 380

2018

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Functional characterization of human pluripotent stem cell-derived arterial endothelial cells

Proceedings of the National Academy of Sciences - PNAS, 2017-07, Vol.114 (30), p.E6072-E6078

2017

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An In Vitro Human Segmentation Clock Model Derived from Embryonic Stem Cells

Cell reports (Cambridge), 2019-08, Vol.28 (9), p.2247-2255.e5

2019

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A folic acid‐enriched diet attenuates prostate involution in response to androgen deprivation

The Prostate, 2019-02, Vol.79 (2), p.183-194

2019

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Species-specific roles of the Notch ligands, receptors, and targets orchestrating the signaling landscape of the segmentation clock

Frontiers in cell and developmental biology, 2024-01, Vol.11, p.1327227-1327227

2024

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Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema

PLoS computational biology, 2013-03, Vol.9 (3), p.e1002936-e1002936

2013

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Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

PloS one, 2020-09, Vol.15 (9), p.e0239711

2020

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Colorimetric and Fluorescent Dual-Mode Immunoassay Based on Plasmon-Enhanced Fluorescence of Polymer Dots for Detection of PSA in Whole Blood

ACS applied materials & interfaces, 2019-03, Vol.11 (10), p.9841-9849

2019

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Blimp1 Expression Predicts Embryonic Stem Cell Development In Vitro

Current biology, 2011-10, Vol.21 (20), p.1759-1765

2011

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Chromosome level genome assembly of the Etruscan shrew Suncus etruscus

Scientific data, 2024-02, Vol.11 (1), p.176-176

2024

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Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments

Nature methods, 2015-10, Vol.12 (10), p.947

2015

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SS31, a Small Molecule Antioxidant Peptide, Attenuates β-Amyloid Elevation, Mitochondrial/Synaptic Deterioration and Cognitive Deficit in SAMP8 Mice

Current Alzheimer research, 2016-03, Vol.13 (3), p.297

2016

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An Expandable, Inducible Hemangioblast State Regulated by Fibroblast Growth Factor

Stem cell reports, 2014-12, Vol.3 (6), p.1043-1057

2014

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Enhancing biological signals and detection rates in single-cell RNA-seq experiments with cDNA library equalization

Nucleic acids research, 2022-01, Vol.50 (2), p.e12

2022

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OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data

Bioinformatics, 2016-05, Vol.32 (9), p.1408-1410

2016

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Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro

Genomics (San Diego, Calif.), 2022-05, Vol.114 (3), p.110330, Article 110330

2022

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In vivo replacement of damaged bladder urothelium by Wolffian duct epithelial cells

Proceedings of the National Academy of Sciences - PNAS, 2018-08, Vol.115 (33), p.8394-8399

2018

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Single-cell RNA-seq reveals novel regulators of human embryonic stem cell differentiation to definitive endoderm

A statistical approach for identifying differential distributions in single-cell RNA-seq experiments

SCnorm: robust normalization of single-cell RNA-seq data

Efficient genome engineering in human pluripotent stem cells using Cas9 from Neisseria meningitidis

Network inference with Granger causality ensembles on single-cell transcriptomics

A Novel Approach to Single Cell RNA‐Sequence Analysis Facilitates In Silico Gene Reporting of Human Pluripotent Stem Cell‐Derived Retinal Cell Types

Trendy: segmented regression analysis of expression dynamics in high-throughput ordered profiling experiments

Functional characterization of human pluripotent stem cell-derived arterial endothelial cells

An In Vitro Human Segmentation Clock Model Derived from Embryonic Stem Cells

A folic acid‐enriched diet attenuates prostate involution in response to androgen deprivation

Species-specific roles of the Notch ligands, receptors, and targets orchestrating the signaling landscape of the segmentation clock

Mouse Tmem135 mutation reveals a mechanism involving mitochondrial dynamics that leads to age-dependent retinal pathologies

Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema

Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

Colorimetric and Fluorescent Dual-Mode Immunoassay Based on Plasmon-Enhanced Fluorescence of Polymer Dots for Detection of PSA in Whole Blood

Blimp1 Expression Predicts Embryonic Stem Cell Development In Vitro

Chromosome level genome assembly of the Etruscan shrew Suncus etruscus

Oscope identifies oscillatory genes in unsynchronized single-cell RNA-seq experiments

SS31, a Small Molecule Antioxidant Peptide, Attenuates β-Amyloid Elevation, Mitochondrial/Synaptic Deterioration and Cognitive Deficit in SAMP8 Mice

An Expandable, Inducible Hemangioblast State Regulated by Fibroblast Growth Factor

Enhancing biological signals and detection rates in single-cell RNA-seq experiments with cDNA library equalization

OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data

Rapid changes in chromatin structure during dedifferentiation of primary hepatocytes in vitro

In vivo replacement of damaged bladder urothelium by Wolffian duct epithelial cells

A High-Quality Blue Whale Genome, Segmental Duplications, and Historical Demography

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