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Prediction of disordered regions in proteins based on the meta approach

Bioinformatics, 2008-06, Vol.24 (11), p.1344-1348

2008

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Single-cell RNA-seq public data reveal the gene regulatory network landscape of respiratory epithelial and peripheral immune cells in COVID-19 patients

Frontiers in immunology, 2023-10, Vol.14, p.1194614-1194614

2023

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Landscape of protein–small ligand binding modes

Protein science, 2016-09, Vol.25 (9), p.1659-1671

2016

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ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index

Plant and cell physiology, 2018-01, Vol.59 (1), p.e3-e3

2018

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COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference

Nucleic acids research, 2019-01, Vol.47 (D1), p.D55

2019

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GIANT: pattern analysis of molecular interactions in 3D structures of protein-small ligand complexes

BMC bioinformatics, 2014-01, Vol.15 (1), p.12-12, Article 12

2014

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ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

Plant and cell physiology, 2016-01, Vol.57 (1), p.e5-e5

2016

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ATTED-II v11: A Plant Gene Coexpression Database Using a Sample Balancing Technique by Subagging of Principal Components

Plant and cell physiology, 2022-06, Vol.63 (6), p.869-881

2022

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PrDOS: prediction of disordered protein regions from amino acid sequence

Nucleic acids research, 2007-07, Vol.35 (Web Server issue), p.W460

2007

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Current status and future perspectives of the evaluation of missense variants by using three-dimensional structures of proteins

Biophysics and Physicobiology, 2022, Vol.19, pp.e190023

2022

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Coexpression landscape in ATTED-II: Usage of gene list and gene network for various types of pathways

Journal of plant research, 2010-05, Vol.123 (3), p.311-319

2010

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Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis

Bioinformatics, 2009-10, Vol.25 (20), p.2677-2684

2009

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ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index

Plant and cell physiology, 2018-02, Vol.59 (2), p.440-440

2018

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Theoretical characterisation of strand cross-correlation in ChIP-seq

BMC bioinformatics, 2020-09, Vol.21 (1), p.1-417, Article 417

2020

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Identification and Validation of Combination Plasma Biomarker of Afamin, Fibronectin and Sex Hormone-Binding Globulin to Predict Pre-eclampsia

Biological and Pharmaceutical Bulletin, 2021/06/01, Vol.44(6), pp.804-815

2021

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Ligand-binding site prediction of proteins based on known fragment–fragment interactions

Bioinformatics, 2010-06, Vol.26 (12), p.1493-1499

2010

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De novo profile generation based on sequence context specificity with the long short-term memory network

BMC bioinformatics, 2018-07, Vol.19 (1), p.272-272, Article 272

2018

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High levels of chromosomal instability facilitate the tumor growth and sphere formation

Cancer science, 2022-08, Vol.113 (8), p.2727-2737

2022

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ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants

Plant and cell physiology, 2014-01, Vol.55 (1), p.e6-e6

2014

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Ethnic and trans-ethnic genome-wide association studies identify new loci influencing Japanese Alzheimer's disease risk

Translational psychiatry, 2021-03, Vol.11 (1), p.151-151, Article 151

2021

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Cohort Profile: Tohoku Medical Megabank Project Birth and Three-Generation Cohort Study (TMM BirThree Cohort Study): rationale, progress and perspective

International journal of epidemiology, 2020-02, Vol.49 (1), p.18-19m

2020

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3.5KJPNv2: an allele frequency panel of 3552 Japanese individuals including the X chromosome

Human genome variation, 2019-06, Vol.6 (1), p.28-28, Article 28

2019

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Whole exome sequencing and establishment of an organoid culture of the carcinoma showing thymus-like differentiation (CASTLE) of the parotid gland

Virchows Archiv : an international journal of pathology, 2021-06, Vol.478 (6), p.1149-1159

2021

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ALCOdb: Gene Coexpression Database for Microalgae

Plant and cell physiology, 2016-01, Vol.57 (1), p.e3-e3

2016

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A genotype imputation method for de-identified haplotype reference information by using recurrent neural network

PLoS computational biology, 2020-10, Vol.16 (10), p.e1008207-e1008207

2020

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Prediction of disordered regions in proteins based on the meta approach

Single-cell RNA-seq public data reveal the gene regulatory network landscape of respiratory epithelial and peripheral immune cells in COVID-19 patients

Landscape of protein–small ligand binding modes

ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index

COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference

GIANT: pattern analysis of molecular interactions in 3D structures of protein-small ligand complexes

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression

ATTED-II v11: A Plant Gene Coexpression Database Using a Sample Balancing Technique by Subagging of Principal Components

PrDOS: prediction of disordered protein regions from amino acid sequence

Current status and future perspectives of the evaluation of missense variants by using three-dimensional structures of proteins

Coexpression landscape in ATTED-II: Usage of gene list and gene network for various types of pathways

Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis

ATTED-II in 2018: A Plant Coexpression Database Based on Investigation of the Statistical Property of the Mutual Rank Index

Theoretical characterisation of strand cross-correlation in ChIP-seq

Identification and Validation of Combination Plasma Biomarker of Afamin, Fibronectin and Sex Hormone-Binding Globulin to Predict Pre-eclampsia

Ligand-binding site prediction of proteins based on known fragment–fragment interactions

De novo profile generation based on sequence context specificity with the long short-term memory network

High levels of chromosomal instability facilitate the tumor growth and sphere formation

ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants

Ethnic and trans-ethnic genome-wide association studies identify new loci influencing Japanese Alzheimer's disease risk

Cohort Profile: Tohoku Medical Megabank Project Birth and Three-Generation Cohort Study (TMM BirThree Cohort Study): rationale, progress and perspective

3.5KJPNv2: an allele frequency panel of 3552 Japanese individuals including the X chromosome

Whole exome sequencing and establishment of an organoid culture of the carcinoma showing thymus-like differentiation (CASTLE) of the parotid gland

ALCOdb: Gene Coexpression Database for Microalgae

A genotype imputation method for de-identified haplotype reference information by using recurrent neural network

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