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Phosphorylation in Protein-Protein Binding: Effect on Stability and Function

Structure (London), 2011-12, Vol.19 (12), p.1807-1815

2011

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Finding driver mutations in cancer: Elucidating the role of background mutational processes

PLoS computational biology, 2019-04, Vol.15 (4), p.e1006981

2019

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DNA methylation: Precise modulation of chromatin structure and dynamics

Current opinion in structural biology, 2022-08, Vol.75, p.102430-102430, Article 102430

2022

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Interpretable deep residual network uncovers nucleosome positioning and associated features

Nucleic acids research, 2024-07, Vol.52 (15), p.8734-8745

2024

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Molecular Mechanisms of Disease-Causing Missense Mutations

Journal of molecular biology, 2013-11, Vol.425 (21), p.3919-3936

2013

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Histone variant H2A.Z modulates nucleosome dynamics to promote DNA accessibility

Nature communications, 2023-02, Vol.14 (1), p.769-769, Article 769

2023

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Cancer driver mutations: predictions and reality

Trends in molecular medicine, 2023-07, Vol.29 (7), p.554-566

2023

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MutaBind estimates and interprets the effects of sequence variants on protein-protein interactions

Nucleic acids research, 2016-07, Vol.44 (W1), p.W494-W501

2016

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Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states

Proceedings of the National Academy of Sciences - PNAS, 2010-11, Vol.107 (47), p.20352-20357

2010

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Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails

Nature communications, 2021-09, Vol.12 (1), p.5280-5280, Article 5280

2021

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Deciphering protein-protein interactions. Part I. Experimental techniques and databases

PLoS computational biology, 2007-03, Vol.3 (3), p.e42-e42

2007

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DNA methylation cues in nucleosome geometry, stability and unwrapping

Nucleic acids research, 2022-02, Vol.50 (4), p.1864-1874

2022

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Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners

PLoS computational biology, 2007-04, Vol.3 (4), p.e43-e43

2007

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Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms

Molecular cell, 2021-01, Vol.81 (1), p.166-182.e6

2021

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Histone tails as signaling antennas of chromatin

Current opinion in structural biology, 2021-04, Vol.67, p.153-160

2021

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Computational Approaches to Prioritize Cancer Driver Missense Mutations

International journal of molecular sciences, 2018-07, Vol.19 (7), p.2113

2018

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Diving into Chromatin across Space and Time

Journal of molecular biology, 2021-03, Vol.433 (6), p.166884-166884, Article 166884

2021

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Cancer missense mutations alter binding properties of proteins and their interaction networks

PloS one, 2013-06, Vol.8 (6), p.e66273

2013

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Coupling between Histone Conformations and DNA Geometry in Nucleosomes on a Microsecond Timescale: Atomistic Insights into Nucleosome Functions

Journal of molecular biology, 2016-01, Vol.428 (1), p.221-237

2016

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Physicochemical mechanisms of protein regulation by phosphorylation

Frontiers in genetics, 2014-08, Vol.5, p.270-270

2014

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Predicting the Impact of Missense Mutations on Protein–Protein Binding Affinity

Journal of chemical theory and computation, 2014-04, Vol.10 (4), p.1770-1780

2014

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MutaBind2: Predicting the Impacts of Single and Multiple Mutations on Protein-Protein Interactions

iScience, 2020-03, Vol.23 (3), p.100939-100939, Article 100939

2020

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Structural and functional roles of coevolved sites in proteins

PloS one, 2010-01, Vol.5 (1), p.e8591-e8591

2010

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Crosstalk between Signaling Pathways Provided by Single and Multiple Protein Phosphorylation Sites

Journal of molecular biology, 2015-01, Vol.427 (2), p.511-520

2015

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Human Histone Interaction Networks: An Old Concept, New Trends

Journal of molecular biology, 2021-03, Vol.433 (6), p.166684-166684, Article 166684

2021

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Phosphorylation in Protein-Protein Binding: Effect on Stability and Function

Finding driver mutations in cancer: Elucidating the role of background mutational processes

DNA methylation: Precise modulation of chromatin structure and dynamics

Interpretable deep residual network uncovers nucleosome positioning and associated features

Molecular Mechanisms of Disease-Causing Missense Mutations

Histone variant H2A.Z modulates nucleosome dynamics to promote DNA accessibility

Cancer driver mutations: predictions and reality

MutaBind estimates and interprets the effects of sequence variants on protein-protein interactions

Mechanisms of protein oligomerization, the critical role of insertions and deletions in maintaining different oligomeric states

Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails

Deciphering protein-protein interactions. Part I. Experimental techniques and databases

DNA methylation cues in nucleosome geometry, stability and unwrapping

Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners

Distinct Structures and Dynamics of Chromatosomes with Different Human Linker Histone Isoforms

Histone tails as signaling antennas of chromatin

Computational Approaches to Prioritize Cancer Driver Missense Mutations

Diving into Chromatin across Space and Time

Cancer missense mutations alter binding properties of proteins and their interaction networks

Coupling between Histone Conformations and DNA Geometry in Nucleosomes on a Microsecond Timescale: Atomistic Insights into Nucleosome Functions

Physicochemical mechanisms of protein regulation by phosphorylation

Predicting the Impact of Missense Mutations on Protein–Protein Binding Affinity

MutaBind2: Predicting the Impacts of Single and Multiple Mutations on Protein-Protein Interactions

Structural and functional roles of coevolved sites in proteins

Crosstalk between Signaling Pathways Provided by Single and Multiple Protein Phosphorylation Sites

Human Histone Interaction Networks: An Old Concept, New Trends

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