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A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances

Cell, 2015-10, Vol.163 (3), p.712-723

2015

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Whole-Genome Bisulfite Sequencing of Two Distinct Interconvertible DNA Methylomes of Mouse Embryonic Stem Cells

Cell stem cell, 2013-09, Vol.13 (3), p.360-369

2013

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Extracting gene function from protein–protein interactions using Quantitative BAC InteraCtomics (QUBIC)

Methods (San Diego, Calif.), 2011-04, Vol.53 (4), p.453-459

2011

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Activin/nodal signaling and NANOG orchestrate human embryonic stem cell fate decisions by controlling the H3K4me3 chromatin mark

Genes & development, 2015-04, Vol.29 (7), p.702-717

2015

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Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

Nature, 2008-10, Vol.455 (7217), p.1251-1254

2008

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High confidence determination of specific protein–protein interactions using quantitative mass spectrometry

Current opinion in biotechnology, 2008-08, Vol.19 (4), p.331-337

2008

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Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Proteome Quantitation of Mouse Embryonic Stem Cells to a Depth of 5,111 Proteins

Molecular & cellular proteomics, 2008-04, Vol.7 (4), p.672-683

2008

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RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity

PloS one, 2011-05, Vol.6 (5), p.e19470-e19470

2011

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A covalent and cleavable antibody-DNA conjugation strategy for sensitive protein detection via immuno-PCR

Scientific reports, 2016-03, Vol.6 (1), p.22675-22675, Article 22675

2016

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Epigenetic Repression of Androgen Receptor Transcription in Mutation-Negative Androgen Insensitivity Syndrome (AIS Type II)

The journal of clinical endocrinology and metabolism, 2018-12, Vol.103 (12), p.4617-4627

2018

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The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression

Nature communications, 2017-02, Vol.8 (1), p.14418-14418, Article 14418

2017

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A Quantitative Proteomics Tool To Identify DNA–Protein Interactions in Primary Cells or Blood

Journal of proteome research, 2015-02, Vol.14 (2), p.1315-1329

2015

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genome-wide screen for genes affecting eisosomes reveals Nce102 function in sphingolipid signaling

The Journal of cell biology, 2009-06, Vol.185 (7), p.1227-1242

2009

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The Vertebrate Mitotic Checkpoint Protein BUBR1 Is an Unusual Pseudokinase

Developmental cell, 2012-06, Vol.22 (6), p.1321-1329

2012

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Genome-wide binding of MBD2 reveals strong preference for highly methylated loci

PloS one, 2014-06, Vol.9 (6), p.e99603

2014

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The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs

Cell reports (Cambridge), 2016-11, Vol.17 (8), p.2087-2100

2016

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A Polymorphic Enhancer near GREM1 Influences Bowel Cancer Risk through Differential CDX2 and TCF7L2 Binding

Cell reports (Cambridge), 2014-08, Vol.8 (4), p.983-990

2014

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The SMAD2/3 interactome reveals that TGFβ controls m 6 A mRNA methylation in pluripotency

Nature (London), 2018-03, Vol.555 (7695), p.256

2018

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Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis

Proteomics (Weinheim), 2008-12, Vol.8 (23-24), p.4862-4872

2008

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How Much Peptide Sequence Information Is Contained in Ion Trap Tandem Mass Spectra?

Journal of the American Society for Mass Spectrometry, 2008-12, Vol.19 (12), p.1813-1820

2008

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Genomics meets proteomics: identifying the culprits in disease

Human genetics, 2014-06, Vol.133 (6), p.689-700

2014

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A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly

Nature cell biology, 2011-07, Vol.13 (7), p.809

2011

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An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II

Nature structural & molecular biology, 2009-01, Vol.16 (1), p.91-93

2009

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Large-scale De Novo Prediction of Physical Protein-Protein Association

Molecular & cellular proteomics, 2011-11, Vol.10 (11), p.M111.010629-M111.010629, Article M111.010629

2011

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A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances

Whole-Genome Bisulfite Sequencing of Two Distinct Interconvertible DNA Methylomes of Mouse Embryonic Stem Cells

Extracting gene function from protein–protein interactions using Quantitative BAC InteraCtomics (QUBIC)

Activin/nodal signaling and NANOG orchestrate human embryonic stem cell fate decisions by controlling the H3K4me3 chromatin mark

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

High confidence determination of specific protein–protein interactions using quantitative mass spectrometry

Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and Proteome Quantitation of Mouse Embryonic Stem Cells to a Depth of 5,111 Proteins

RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity

A covalent and cleavable antibody-DNA conjugation strategy for sensitive protein detection via immuno-PCR

Epigenetic Repression of Androgen Receptor Transcription in Mutation-Negative Androgen Insensitivity Syndrome (AIS Type II)

The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression

A Quantitative Proteomics Tool To Identify DNA–Protein Interactions in Primary Cells or Blood

genome-wide screen for genes affecting eisosomes reveals Nce102 function in sphingolipid signaling

The Vertebrate Mitotic Checkpoint Protein BUBR1 Is an Unusual Pseudokinase

Genome-wide binding of MBD2 reveals strong preference for highly methylated loci

The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs

A Polymorphic Enhancer near GREM1 Influences Bowel Cancer Risk through Differential CDX2 and TCF7L2 Binding

The SMAD2/3 interactome reveals that TGFβ controls m 6 A mRNA methylation in pluripotency

Peptide separation with immobilized pI strips is an attractive alternative to in-gel protein digestion for proteome analysis

The CRAPome: a contaminant repository for affinity purification-mass spectrometry data

How Much Peptide Sequence Information Is Contained in Ion Trap Tandem Mass Spectra?

Genomics meets proteomics: identifying the culprits in disease

A systematic RNAi synthetic interaction screen reveals a link between p53 and snoRNP assembly

An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II

Large-scale De Novo Prediction of Physical Protein-Protein Association

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