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UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy

Genome research, 2017-03, Vol.27 (3), p.491-499

2017

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GAT: a simulation framework for testing the association of genomic intervals

Bioinformatics, 2013-08, Vol.29 (16), p.2046-2048

2013

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Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia

Genome research, 2014-12, Vol.24 (12), p.1918-1931

2014

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Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes

Nature communications, 2014-06, Vol.5 (1), p.3979, Article 3979

2014

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Sequencing of human genomes with nanopore technology

Nature communications, 2019-04, Vol.10 (1), p.1869-9, Article 1869

2019

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Targeting Polycomb to Pericentric Heterochromatin in Embryonic Stem Cells Reveals a Role for H2AK119u1 in PRC2 Recruitment

Cell reports (Cambridge), 2014-06, Vol.7 (5), p.1456-1470

2014

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Long noncoding RNAs in B-cell development and activation

Blood, 2016-08, Vol.128 (7), p.e10-e19

2016

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Chip-based digital PCR as a novel detection method for quantifying microRNAs in acute myocardial infarction patients

Acta pharmacologica Sinica, 2018-07, Vol.39 (7), p.1217-1227

2018

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Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates

eLife, 2013-02, Vol.2, p.e00348-e00348

2013

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Uncertainty in homology inferences: assessing and improving genomic sequence alignment

Genome Research, 2008-02, Vol.18 (2), p.298-309

2008

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Defining the microbial transcriptional response to colitis through integrated host and microbiome profiling

The ISME Journal, 2016-10, Vol.10 (10), p.2389-2404

2016

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Rapid automatic detection and alignment of repeats in protein sequences

Proteins, structure, function, and bioinformatics, 2000-11, Vol.41 (2), p.224-237

2000

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Investigation into the role of the germline epigenome in the transmission of glucocorticoid-programmed effects across generations

Genome Biology, 2018-04, Vol.19 (1), p.50-15, Article 50

2018

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IRF5:RelA Interaction Targets Inflammatory Genes in Macrophages

Cell reports (Cambridge), 2014-09, Vol.8 (5), p.1308-1317

2014

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CGAT: computational genomics analysis toolkit

Bioinformatics, 2014-05, Vol.30 (9), p.1290-1291

2014

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Inflammation in acute coronary syndrome: Expression of TLR2 mRNA is increased in platelets of patients with ACS

PloS one, 2019-10, Vol.14 (10), p.e0224181-e0224181

2019

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Clinical analysis on diagnostic accuracy of Bosch Vivalytic SARS-CoV-2 point-of-care test and evaluation of cycle threshold at admission for COVID-19 risk assessment

BMC infectious diseases, 2022-05, Vol.22 (1), p.486-486, Article 486

2022

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11β-hydroxysteroid dehydrogenase-1 deficiency alters the gut microbiome response to Western diet

Journal of endocrinology, 2017-02, Vol.232 (2), p.273-283

2017

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Genomic Response to Vitamin D Supplementation in the Setting of a Randomized, Placebo-Controlled Trial

EBioMedicine, 2018-05, Vol.31, p.133-142

2018

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Variable Strength of Translational Selection Among 12 Drosophila Species

Genetics (Austin), 2007-11, Vol.177 (3), p.1337-1348

2007

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Expression of the oxygen-sensitive transcription factor subunit HIF-1α in patients suffering from secondary Raynaud syndrome

Acta pharmacologica Sinica, 2019-04, Vol.40 (4), p.500-506

2019

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Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence

BMC genomics, 2013-02, Vol.14 (1), p.95-95, Article 95

2013

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Sequencing depth and coverage: key considerations in genomic analyses

Nature reviews. Genetics, 2014-02, Vol.15 (2), p.121-132

2014

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Extracellular HtrA2 Induces Apoptosis in Human Umbilical Vein Endothelial Cells

International journal of molecular sciences, 2019-10, Vol.20 (21), p.5446

2019

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Medical history of coronary artery disease and time to electrocardiogram in the emergency department: a real-life, single-center, retrospective analysis

BMC cardiovascular disorders, 2021-10, Vol.21 (1), p.480-480, Article 480

2021

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UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy

GAT: a simulation framework for testing the association of genomic intervals

Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-antigen expression in thymic epithelia

Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes

Sequencing of human genomes with nanopore technology

Targeting Polycomb to Pericentric Heterochromatin in Embryonic Stem Cells Reveals a Role for H2AK119u1 in PRC2 Recruitment

Long noncoding RNAs in B-cell development and activation

Chip-based digital PCR as a novel detection method for quantifying microRNAs in acute myocardial infarction patients

Epigenetic conservation at gene regulatory elements revealed by non-methylated DNA profiling in seven vertebrates

Uncertainty in homology inferences: assessing and improving genomic sequence alignment

Defining the microbial transcriptional response to colitis through integrated host and microbiome profiling

Rapid automatic detection and alignment of repeats in protein sequences

Investigation into the role of the germline epigenome in the transmission of glucocorticoid-programmed effects across generations

IRF5:RelA Interaction Targets Inflammatory Genes in Macrophages

CGAT: computational genomics analysis toolkit

Inflammation in acute coronary syndrome: Expression of TLR2 mRNA is increased in platelets of patients with ACS

Clinical analysis on diagnostic accuracy of Bosch Vivalytic SARS-CoV-2 point-of-care test and evaluation of cycle threshold at admission for COVID-19 risk assessment

11β-hydroxysteroid dehydrogenase-1 deficiency alters the gut microbiome response to Western diet

Genomic Response to Vitamin D Supplementation in the Setting of a Randomized, Placebo-Controlled Trial

Variable Strength of Translational Selection Among 12 Drosophila Species

Expression of the oxygen-sensitive transcription factor subunit HIF-1α in patients suffering from secondary Raynaud syndrome

Insights into the evolution of Darwin's finches from comparative analysis of the Geospiza magnirostris genome sequence

Sequencing depth and coverage: key considerations in genomic analyses

Extracellular HtrA2 Induces Apoptosis in Human Umbilical Vein Endothelial Cells

Medical history of coronary artery disease and time to electrocardiogram in the emergency department: a real-life, single-center, retrospective analysis

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