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Bacterial communities of diverse Drosophila species: ecological context of a host-microbe model system

PLoS genetics, 2011-09, Vol.7 (9), p.e1002272-e1002272

2011

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A simple, fast, and accurate method of phylogenomic inference

Genome biology, 2008-01, Vol.9 (10), p.R151-R151

2008

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Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota

PLoS biology, 2018-08, Vol.16 (8), p.e2006352-e2006352

2018

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Structure, variation, and assembly of the root-associated microbiomes of rice

Proceedings of the National Academy of Sciences - PNAS, 2015-02, Vol.112 (8), p.E911-E920

2015

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Research priorities for harnessing plant microbiomes in sustainable agriculture

PLoS biology, 2017-03, Vol.15 (3), p.e2001793

2017

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Systematic identification of gene families for use as "markers" for phylogenetic and phylogeny-driven ecological studies of bacteria and archaea and their major subgroups

PloS one, 2013-10, Vol.8 (10), p.e77033-e77033

2013

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Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

PLoS computational biology, 2012-10, Vol.8 (10), p.e1002743-e1002743

2012

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An integrated pipeline for de novo assembly of microbial genomes

PloS one, 2012-09, Vol.7 (9), p.e42304-e42304

2012

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Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina

PloS one, 2020-07, Vol.15 (7), p.e0236135-e0236135

2020

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Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications

BMC genomics, 2008-12, Vol.9 (1), p.597-597, Article 597

2008

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Phylogeny of bacterial and archaeal genomes using conserved genes: supertrees and supermatrices

PloS one, 2013-04, Vol.8 (4), p.e62510-e62510

2013

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Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation

The ISME Journal, 2019-04, Vol.13 (4), p.921-936

2019

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Accounting for alignment uncertainty in phylogenomics

PloS one, 2012-01, Vol.7 (1), p.e30288-e30288

2012

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2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission

mSystems, 2020-04, Vol.5 (2)

2020

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Host-associated microbiomes drive structure and function of marine ecosystems

PLoS biology, 2019-11, Vol.17 (11), p.e3000533

2019

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Drivers of bacterial β-diversity depend on spatial scale

Proceedings of the National Academy of Sciences - PNAS, 2011-05, Vol.108 (19), p.7850-7854

2011

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Assembling the marine metagenome, one cell at a time

PloS one, 2009-04, Vol.4 (4), p.e5299-e5299

2009

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Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes

PLoS biology, 2007-03, Vol.5 (3), p.e82-e82

2007

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Insights into the phylogeny and coding potential of microbial dark matter

Nature (London), 2013-07, Vol.499 (7459), p.431-437

2013

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Yeast Communities of Diverse Drosophila Species: Comparison of Two Symbiont Groups in the Same Hosts

Applied and Environmental Microbiology, 2012-10, Vol.78 (20), p.7327-7336

2012

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Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment

Nature communications, 2013-08, Vol.4 (1), p.2120-2120, Article 2120

2013

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Global-Scale Structure of the Eelgrass Microbiome

Applied and environmental microbiology, 2017-06, Vol.83 (12)

2017

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Metagenomic sequencing of an in vitro-simulated microbial community

PloS one, 2010-04, Vol.5 (4), p.e10209-e10209

2010

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Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing

Proceedings of the National Academy of Sciences - PNAS, 2013-01, Vol.110 (3), p.1053-1058

2013

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Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response

PLoS genetics, 2014-11, Vol.10 (11), p.e1004784-e1004784

2014

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Bacterial communities of diverse Drosophila species: ecological context of a host-microbe model system

A simple, fast, and accurate method of phylogenomic inference

Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota

Structure, variation, and assembly of the root-associated microbiomes of rice

Research priorities for harnessing plant microbiomes in sustainable agriculture

Systematic identification of gene families for use as "markers" for phylogenetic and phylogeny-driven ecological studies of bacteria and archaea and their major subgroups

Incorporating 16S gene copy number information improves estimates of microbial diversity and abundance

An integrated pipeline for de novo assembly of microbial genomes

Fungi, bacteria and oomycota opportunistically isolated from the seagrass, Zostera marina

Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications

Phylogeny of bacterial and archaeal genomes using conserved genes: supertrees and supermatrices

Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation

Accounting for alignment uncertainty in phylogenomics

2019 Novel Coronavirus (COVID-19) Pandemic: Built Environment Considerations To Reduce Transmission

Host-associated microbiomes drive structure and function of marine ecosystems

Drivers of bacterial β-diversity depend on spatial scale

Assembling the marine metagenome, one cell at a time

Environmental shotgun sequencing: its potential and challenges for studying the hidden world of microbes

Insights into the phylogeny and coding potential of microbial dark matter

Yeast Communities of Diverse Drosophila Species: Comparison of Two Symbiont Groups in the Same Hosts

Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment

Global-Scale Structure of the Eelgrass Microbiome

Metagenomic sequencing of an in vitro-simulated microbial community

Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing

Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response

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