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High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

PLoS genetics, 2013-05, Vol.9 (5), p.e1003495-e1003495

2013

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Fast mapping of short sequences with mismatches, insertions and deletions using index structures

PLoS computational biology, 2009-09, Vol.5 (9), p.e1000502-e1000502

2009

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Noncanonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9

Science (American Association for the Advancement of Science), 2021-05, Vol.372 (6545), p.941-948

2021

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Identifying Small Open Reading Frames in Prokaryotes with Ribosome Profiling

Journal of bacteriology, 2022-01, Vol.204 (1), p.e0029421

2022

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The CsrA-FliW network controls polar localization of the dual-function flagellin mRNA in Campylobacter jejuni

Nature communications, 2016-05, Vol.7 (1), p.11667-11667, Article 11667

2016

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experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803

Proceedings of the National Academy of Sciences - PNAS, 2011-02, Vol.108 (5), p.2124-2129

2011

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Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

BMC genomics, 2014-08, Vol.15 (1), p.684-684

2014

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The small non-coding RNA RsaE influences extracellular matrix composition in Staphylococcus epidermidis biofilm communities

PLoS pathogens, 2019-03, Vol.15 (3), p.e1007618-e1007618

2019

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The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase

The Plant cell, 2012-01, Vol.24 (1), p.123-136

2012

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RNase III-mediated processing of a trans -acting bacterial sRNA and its cis -encoded antagonist

eLife, 2021-11, Vol.10

2021

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Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability

Proceedings of the National Academy of Sciences - PNAS, 2009-12, Vol.106 (51), p.21878-21882

2009

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Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens

PloS one, 2014-10, Vol.9 (10), p.e110427-e110427

2014

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The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression

BMC genomics, 2012-01, Vol.13 (1), p.25-25, Article 25

2012

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A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence

microLife, 2020-10, Vol.1 (1), p.uqaa002-uqaa002

2020

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Tetrachloroethene respiration in Sulfurospirillum species is regulated by a two‐component system as unraveled by comparative genomics, transcriptomics, and regulator binding studies

MicrobiologyOpen (Weinheim), 2020-12, Vol.9 (12), p.e1138-n/a

2020

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High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates: e1003495

PLoS genetics, 2013-05, Vol.9 (5)

2013

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Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures: e1000502

PLoS computational biology, 2009-09, Vol.5 (9)

2009

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Distinct genomic integration of MLV and SIV vectors in primate hematopoietic stem and progenitor cells

PLoS biology, 2004-12, Vol.2 (12), p.e423-e423

2004

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Hypomethylating agents synergize with irinotecan to improve response to chemotherapy in colorectal cancer cells

PloS one, 2017-04, Vol.12 (4), p.e0176139-e0176139

2017

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sodC-based real-time PCR for detection of Neisseria meningitidis

PloS one, 2011-05, Vol.6 (5), p.e19361-e19361

2011

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Harnessing genetic potential of wheat germplasm banks through impact-oriented-prebreeding for future food and nutritional security

Scientific reports, 2018-08, Vol.8 (1), p.12527-11, Article 12527

2018

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Obesity genetics and cardiometabolic health: Potential for risk prediction

Diabetes, obesity & metabolism, 2019-05, Vol.21 (5), p.1088-1100

2019

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Identification of microRNAs and Their Expression in Leaf Tissues of Guava (Psidium guajava L.) under Salinity Stress

Agronomy (Basel), 2020-12, Vol.10 (12), p.1920

2020

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Integrating gene annotation with orthology inference at scale

Science (American Association for the Advancement of Science), 2023-04, Vol.380 (6643), p.eabn3107-eabn3107

2023

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Genomic data in the All of Us Research Program

Nature (London), 2024-03, Vol.627 (8003), p.340-3

2024

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High-resolution transcriptome maps reveal strain-specific regulatory features of multiple Campylobacter jejuni isolates

Fast mapping of short sequences with mismatches, insertions and deletions using index structures

Noncanonical crRNAs derived from host transcripts enable multiplexable RNA detection by Cas9

Identifying Small Open Reading Frames in Prokaryotes with Ribosome Profiling

The CsrA-FliW network controls polar localization of the dual-function flagellin mRNA in Campylobacter jejuni

experimentally anchored map of transcriptional start sites in the model cyanobacterium Synechocystis sp. PCC6803

Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

The small non-coding RNA RsaE influences extracellular matrix composition in Staphylococcus epidermidis biofilm communities

The Primary Transcriptome of Barley Chloroplasts: Numerous Noncoding RNAs and the Dominating Role of the Plastid-Encoded RNA Polymerase

RNase III-mediated processing of a trans -acting bacterial sRNA and its cis -encoded antagonist

Deep sequencing analysis of the Methanosarcina mazei Gö1 transcriptome in response to nitrogen availability

Profound impact of Hfq on nutrient acquisition, metabolism and motility in the plant pathogen Agrobacterium tumefaciens

The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression

A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence

Tetrachloroethene respiration in Sulfurospirillum species is regulated by a two‐component system as unraveled by comparative genomics, transcriptomics, and regulator binding studies

High-Resolution Transcriptome Maps Reveal Strain-Specific Regulatory Features of Multiple Campylobacter jejuni Isolates: e1003495

Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures: e1000502

Distinct genomic integration of MLV and SIV vectors in primate hematopoietic stem and progenitor cells

Hypomethylating agents synergize with irinotecan to improve response to chemotherapy in colorectal cancer cells

sodC-based real-time PCR for detection of Neisseria meningitidis

Harnessing genetic potential of wheat germplasm banks through impact-oriented-prebreeding for future food and nutritional security

Obesity genetics and cardiometabolic health: Potential for risk prediction

Identification of microRNAs and Their Expression in Leaf Tissues of Guava (Psidium guajava L.) under Salinity Stress

Integrating gene annotation with orthology inference at scale

Genomic data in the All of Us Research Program

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