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SRAMP: prediction of mammalian N6-methyladenosine (m6A) sites based on sequence-derived features

Nucleic acids research, 2016-06, Vol.44 (10), p.e91

2016

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Toxicity of Ionic Liquids

Clean : soil, air, water, 2007-02, Vol.35 (1), p.42-48

2007

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Transfer learning via multi-scale convolutional neural layers for human–virus protein–protein interaction prediction

Bioinformatics, 2021-12, Vol.37 (24), p.4771-4778

2021

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Isolation of SARS-CoV-2-related coronavirus from Malayan pangolins

Nature (London), 2020-07, Vol.583 (7815), p.286-289

2020

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hCKSAAP_UbSite: Improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties

Biochimica et biophysica acta, 2013-08, Vol.1834 (8), p.1461-1467

2013

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Prediction of human-virus protein-protein interactions through a sequence embedding-based machine learning method

Computational and structural biotechnology journal, 2020-01, Vol.18, p.153-161

2020

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Towards more accurate prediction of ubiquitination sites: a comprehensive review of current methods, tools and features

Briefings in bioinformatics, 2015-07, Vol.16 (4), p.640-657

2015

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The MERS-CoV Receptor DPP4 as a Candidate Binding Target of the SARS-CoV-2 Spike

iScience, 2020-06, Vol.23 (6), p.101160-101160, Article 101160

2020

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Machine-Learning-Based Predictor of Human–Bacteria Protein–Protein Interactions by Incorporating Comprehensive Host-Network Properties

Journal of proteome research, 2019-05, Vol.18 (5), p.2195-2205

2019

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HVIDB: a comprehensive database for human–virus protein–protein interactions

Briefings in bioinformatics, 2021-03, Vol.22 (2), p.832-844

2021

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ASTool: An Easy-to-Use Tool to Accurately Identify Alternative Splicing Events from Plant RNA-Seq Data

International journal of molecular sciences, 2022-04, Vol.23 (8), p.4079

2022

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Three chromosome-level duck genome assemblies provide insights into genomic variation during domestication

Nature communications, 2021-10, Vol.12 (1), p.5932-5932, Article 5932

2021

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AbAgIntPre: A deep learning method for predicting antibody-antigen interactions based on sequence information

Frontiers in immunology, 2022-12, Vol.13, p.1053617-1053617

2022

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PlaASDB: a comprehensive database of plant alternative splicing events in response to stress

BMC plant biology, 2023-04, Vol.23 (1), p.225-225, Article 225

2023

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Comparative analysis of the genomes of two field isolates of the rice blast fungus Magnaporthe oryzae

PLoS genetics, 2012-08, Vol.8 (8), p.e1002869

2012

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The zinc-finger bearing xenogeneic silencer MucR in α-proteobacteria balances adaptation and regulatory integrity

The ISME Journal, 2022-03, Vol.16 (3), p.738-749

2022

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Pre-trained protein language model sheds new light on the prediction of Arabidopsis protein-protein interactions

Plant methods, 2023-12, Vol.19 (1), p.141-141, Article 141

2023

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Understanding Human-Virus Protein-Protein Interactions Using a Human Protein Complex-Based Analysis Framework

mSystems, 2019-03, Vol.4 (2)

2019

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Gene coexpression network during ontogeny in the yellow fever mosquito, Aedes aegypti

BMC genomics, 2023-06, Vol.24 (1), p.301-301, Article 301

2023

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Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs

PloS one, 2015-06, Vol.10 (6), p.e0129635-e0129635

2015

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Badh2, Encoding Betaine Aldehyde Dehydrogenase, Inhibits the Biosynthesis of 2-Acetyl-1-Pyrroline, a Major Component in Rice Fragrance

The Plant cell, 2008-07, Vol.20 (7), p.1850-1861

2008

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PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection

Scientific reports, 2017-07, Vol.7 (1), p.6862-19, Article 6862

2017

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AtKC1 and CIPK23 Synergistically Modulate AKT1-Mediated Low-Potassium Stress Responses in Arabidopsis

Plant physiology (Bethesda), 2016-04, Vol.170 (4), p.2264-2277

2016

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Revealing Shared and Distinct Gene Network Organization in Arabidopsis Immune Responses by Integrative Analysis

Plant physiology (Bethesda), 2015-03, Vol.167 (3), p.1186-1203

2015

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PlaPPISite: a comprehensive resource for plant protein-protein interaction sites

BMC plant biology, 2020-02, Vol.20 (1), p.61-61, Article 61

2020

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SRAMP: prediction of mammalian N6-methyladenosine (m6A) sites based on sequence-derived features

Toxicity of Ionic Liquids

Transfer learning via multi-scale convolutional neural layers for human–virus protein–protein interaction prediction

Isolation of SARS-CoV-2-related coronavirus from Malayan pangolins

hCKSAAP_UbSite: Improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties

Prediction of human-virus protein-protein interactions through a sequence embedding-based machine learning method

Towards more accurate prediction of ubiquitination sites: a comprehensive review of current methods, tools and features

The MERS-CoV Receptor DPP4 as a Candidate Binding Target of the SARS-CoV-2 Spike

Machine-Learning-Based Predictor of Human–Bacteria Protein–Protein Interactions by Incorporating Comprehensive Host-Network Properties

HVIDB: a comprehensive database for human–virus protein–protein interactions

ASTool: An Easy-to-Use Tool to Accurately Identify Alternative Splicing Events from Plant RNA-Seq Data

Three chromosome-level duck genome assemblies provide insights into genomic variation during domestication

AbAgIntPre: A deep learning method for predicting antibody-antigen interactions based on sequence information

PlaASDB: a comprehensive database of plant alternative splicing events in response to stress

Comparative analysis of the genomes of two field isolates of the rice blast fungus Magnaporthe oryzae

The zinc-finger bearing xenogeneic silencer MucR in α-proteobacteria balances adaptation and regulatory integrity

Pre-trained protein language model sheds new light on the prediction of Arabidopsis protein-protein interactions

Understanding Human-Virus Protein-Protein Interactions Using a Human Protein Complex-Based Analysis Framework

Gene coexpression network during ontogeny in the yellow fever mosquito, Aedes aegypti

Computational Identification of Protein Pupylation Sites by Using Profile-Based Composition of k-Spaced Amino Acid Pairs

Badh2, Encoding Betaine Aldehyde Dehydrogenase, Inhibits the Biosynthesis of 2-Acetyl-1-Pyrroline, a Major Component in Rice Fragrance

PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection

AtKC1 and CIPK23 Synergistically Modulate AKT1-Mediated Low-Potassium Stress Responses in Arabidopsis

Revealing Shared and Distinct Gene Network Organization in Arabidopsis Immune Responses by Integrative Analysis

PlaPPISite: a comprehensive resource for plant protein-protein interaction sites

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