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A new dynamic correlation algorithm reveals novel functional aspects in single cell and bulk RNA-seq data

PLoS computational biology, 2018-08, Vol.14 (8), p.e1006391-e1006391

2018

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A Deep Neural Network Model using Random Forest to Extract Feature Representation for Gene Expression Data Classification

Scientific reports, 2018-11, Vol.8 (1), p.16477-9, Article 16477

2018

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A graph-embedded deep feedforward network for disease outcome classification and feature selection using gene expression data

Bioinformatics, 2018-11, Vol.34 (21), p.3727-3737

2018

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AIME: Autoencoder-based integrative multi-omics data embedding that allows for confounder adjustments

PLoS computational biology, 2022-01, Vol.18 (1), p.e1009826-e1009826

2022

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forgeNet: a graph deep neural network model using tree-based ensemble classifiers for feature graph construction

Bioinformatics, 2020-06, Vol.36 (11), p.3507-3515

2020

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ROCS: receiver operating characteristic surface for class-skewed high-throughput data

PloS one, 2012-07, Vol.7 (7), p.e40598

2012

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A hypergraph-based method for large-scale dynamic correlation study at the transcriptomic scale

BMC genomics, 2019-05, Vol.20 (1), p.397-397, Article 397

2019

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apLCMS—adaptive processing of high-resolution LC/MS data

Bioinformatics, 2009-08, Vol.25 (15), p.1930-1936

2009

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An exploratory data analysis method to reveal modular latent structures in high-throughput data

BMC bioinformatics, 2010-08, Vol.11 (1), p.440-440, Article 440

Yu, Tianwei

2010

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Bayesian nonparametric method for genetic dissection of brain activation region

Frontiers in neuroscience, 2023-10, Vol.17, p.1235321-1235321

2023

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An Attention Cascade Global–Local Network for Remote Sensing Scene Classification

Remote sensing (Basel, Switzerland), 2022-05, Vol.14 (9), p.2042

2022

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xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data

BMC bioinformatics, 2013-01, Vol.14 (1), p.15-15, Article 15

2013

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Metabolic Phenotypes of Response to Vaccination in Humans

Cell, 2017-05, Vol.169 (5), p.862-877.e17

2017

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Few‐shot action recognition using task‐adaptive parameters

Electronics letters, 2021-10, Vol.57 (22), p.848-850

2021

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Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma

Environment international, 2019-06, Vol.127, p.503-513

2019

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Transcriptomic dissection of tongue squamous cell carcinoma

BMC genomics, 2008-02, Vol.9 (1), p.69-69, Article 69

2008

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Bayesian network feature finder (BANFF): an R package for gene network feature selection

Bioinformatics (Oxford, England), 2016-12, Vol.32 (23), p.3685-3687

2016

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Graph Random Forest: A Graph Embedded Algorithm for Identifying Highly Connected Important Features

Biomolecules (Basel, Switzerland), 2023-07, Vol.13 (7), p.1153

2023

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Addressing the batch effect issue for LC/MS metabolomics data in data preprocessing

Scientific reports, 2020-08, Vol.10 (1), p.13856-13, Article 13856

2020

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Quantification and deconvolution of asymmetric LC-MS peaks using the bi-Gaussian mixture model and statistical model selection

BMC bioinformatics, 2010-11, Vol.11 (1), p.559-559, Article 559

2010

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microRNA-21 and microRNA-375 from oral cytology as biomarkers for oral tongue cancer detection

Oral oncology, 2016-06, Vol.57, p.15-20

2016

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The exposome in practice: an exploratory panel study of biomarkers of air pollutant exposure in Chinese people aged 60–69 years (China BAPE Study)

Environment international, 2021-12, Vol.157, p.106866, Article 106866

2021

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HK2 Is a Crucial Downstream Regulator of miR-148a for the Maintenance of Sphere-Forming Property and Cisplatin Resistance in Cervical Cancer Cells

Frontiers in oncology, 2021-11, Vol.11, p.794015-794015

2021

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Novel metabolic markers for the risk of diabetes development in American Indians

Diabetes care, 2015-02, Vol.38 (2), p.220-227

2015

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Particulate metal exposures induce plasma metabolome changes in a commuter panel study

PloS one, 2018-09, Vol.13 (9), p.e0203468

2018

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A new dynamic correlation algorithm reveals novel functional aspects in single cell and bulk RNA-seq data

A Deep Neural Network Model using Random Forest to Extract Feature Representation for Gene Expression Data Classification

A graph-embedded deep feedforward network for disease outcome classification and feature selection using gene expression data

AIME: Autoencoder-based integrative multi-omics data embedding that allows for confounder adjustments

forgeNet: a graph deep neural network model using tree-based ensemble classifiers for feature graph construction

ROCS: receiver operating characteristic surface for class-skewed high-throughput data

A hypergraph-based method for large-scale dynamic correlation study at the transcriptomic scale

apLCMS—adaptive processing of high-resolution LC/MS data

An exploratory data analysis method to reveal modular latent structures in high-throughput data

Bayesian nonparametric method for genetic dissection of brain activation region

An Attention Cascade Global–Local Network for Remote Sensing Scene Classification

xMSanalyzer: automated pipeline for improved feature detection and downstream analysis of large-scale, non-targeted metabolomics data

Metabolic Phenotypes of Response to Vaccination in Humans

Few‐shot action recognition using task‐adaptive parameters

Perturbations of the arginine metabolome following exposures to traffic-related air pollution in a panel of commuters with and without asthma

Transcriptomic dissection of tongue squamous cell carcinoma

Bayesian network feature finder (BANFF): an R package for gene network feature selection

Graph Random Forest: A Graph Embedded Algorithm for Identifying Highly Connected Important Features

Addressing the batch effect issue for LC/MS metabolomics data in data preprocessing

Quantification and deconvolution of asymmetric LC-MS peaks using the bi-Gaussian mixture model and statistical model selection

microRNA-21 and microRNA-375 from oral cytology as biomarkers for oral tongue cancer detection

The exposome in practice: an exploratory panel study of biomarkers of air pollutant exposure in Chinese people aged 60–69 years (China BAPE Study)

HK2 Is a Crucial Downstream Regulator of miR-148a for the Maintenance of Sphere-Forming Property and Cisplatin Resistance in Cervical Cancer Cells

Novel metabolic markers for the risk of diabetes development in American Indians

Particulate metal exposures induce plasma metabolome changes in a commuter panel study

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