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Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer

Genome Biology, 2021-01, Vol.22 (1), p.9-9, Article 9

2021

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The jPOST Repository as a Public Data Repository for Shotgun Proteomics

Methods in molecular biology (Clifton, N.J.), 2021, Vol.2259, p.309

2021

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repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomes

Journal of lipid research, 2008, Vol.49 (1), p.183-191

2008

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Mass++: A Visualization and Analysis Tool for Mass Spectrometry

Journal of proteome research, 2014-08, Vol.13 (8), p.3846-3853

2014

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GlycanAnalysis Plug-in: a database search tool for N-glycan structures using mass spectrometry

Bioinformatics, 2015-07, Vol.31 (13), p.2217-2219

2015

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jPOSTrepo: an international standard data repository for proteomes

Nucleic acids research, 2017-01, Vol.45 (D1), p.D1107

2017

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KAAS: an automatic genome annotation and pathway reconstruction server

Nucleic acids research, 2007-07, Vol.35 (Web Server issue), p.W182

2007

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The jPOST environment: an integrated proteomics data repository and database

Nucleic acids research, 2019-01, Vol.47 (D1), p.D1218

2019

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Crystal Structure of Aminomethyltransferase in Complex with Dihydrolipoyl-H-Protein of the Glycine Cleavage System: IMPLICATIONS FOR RECOGNITION OF LIPOYL PROTEIN SUBSTRATE, DISEASE-RELATED MUTATIONS, AND REACTION MECHANISM

The Journal of biological chemistry, 2010-06, Vol.285 (24), p.18684-18692

2010

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Integrated Proteomics Identified Novel Activation of Dynein IC2-GR-COX-1 Signaling in Neurofibromatosis Type I (NF1) Disease Model Cells

Molecular & cellular proteomics, 2013-05, Vol.12 (5), p.1377-1394

2013

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age-related homeostasis mechanism is essential for spontaneous amelioration of hemophilia B Leyden

Proceedings of the National Academy of Sciences - PNAS, 2009-05, Vol.106 (19), p.7921-7926

2009

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Comprehensive analysis of glycosyltransferases in eukaryotic genomes for structural and functional characterization of glycans

Carbohydrate research, 2009-05, Vol.344 (7), p.881-887

2009

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KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D353

2013

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Extracting Sequence Motifs and the Phylogenetic Features of SNARE‐Dependent Membrane Traffic

Traffic (Copenhagen, Denmark), 2006-08, Vol.7 (8), p.1104-1118

2006

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ODB: a database for operon organizations, 2011 update

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D552

2011

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Computational Survey of Sequence Specificity for Protein Terminal Tags Covering Nine Organisms and Its Application to Protein Identification

Journal of proteome research, 2015-02, Vol.14 (2), p.756-767

2015

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Identification of human basic fetoprotein as glucose-6-phosphate isomerase by using N- and C-terminal sequence tags and terminal tag database

Journal of pharmaceutical and biomedical analysis, 2015-08, Vol.112, p.116-125

2015

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A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry

BMC bioinformatics, 2014-11, Vol.15 (1), p.376-376, Article 376

2014

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CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D807

2011

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Crystal Structure of Aminomethyltransferase in Complex with Dihydrolipoyl-H-Protein of the Glycine Cleavage System

The Journal of biological chemistry, 2010-06, Vol.285 (24), p.18684-18692

2010

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The Repertoire of Desaturases for Unsaturated Fatty Acid Synthesis in 397 Genomes

Genome Informatics, 2006, Vol.17(1), pp.173-183

2006

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The repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomess

Journal of lipid research, 2008-01, Vol.49 (1), p.183-191

2008

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Comparative Analysis of Rab GTPases and SNAREs in Eukaryotic Genomes

Genome Informatics, 2002, Vol.13, pp.404-405

2002

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The Construction of a Database for Ubiquitin Signaling Cascade

Genome Informatics, 2003, Vol.14, pp.653-654

2003

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Analysis of Domain Combinations in Eukaryotic Genomes

Genome Informatics, 2003, Vol.14, pp.434-435

2003

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Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer

The jPOST Repository as a Public Data Repository for Shotgun Proteomics

repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomes

Mass++: A Visualization and Analysis Tool for Mass Spectrometry

GlycanAnalysis Plug-in: a database search tool for N-glycan structures using mass spectrometry

jPOSTrepo: an international standard data repository for proteomes

KAAS: an automatic genome annotation and pathway reconstruction server

The jPOST environment: an integrated proteomics data repository and database

Crystal Structure of Aminomethyltransferase in Complex with Dihydrolipoyl-H-Protein of the Glycine Cleavage System: IMPLICATIONS FOR RECOGNITION OF LIPOYL PROTEIN SUBSTRATE, DISEASE-RELATED MUTATIONS, AND REACTION MECHANISM

Integrated Proteomics Identified Novel Activation of Dynein IC2-GR-COX-1 Signaling in Neurofibromatosis Type I (NF1) Disease Model Cells

age-related homeostasis mechanism is essential for spontaneous amelioration of hemophilia B Leyden

Comprehensive analysis of glycosyltransferases in eukaryotic genomes for structural and functional characterization of glycans

KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters

Extracting Sequence Motifs and the Phylogenetic Features of SNARE‐Dependent Membrane Traffic

ODB: a database for operon organizations, 2011 update

Computational Survey of Sequence Specificity for Protein Terminal Tags Covering Nine Organisms and Its Application to Protein Identification

Identification of human basic fetoprotein as glucose-6-phosphate isomerase by using N- and C-terminal sequence tags and terminal tag database

A simple peak detection and label-free quantitation algorithm for chromatography-mass spectrometry

CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

Crystal Structure of Aminomethyltransferase in Complex with Dihydrolipoyl-H-Protein of the Glycine Cleavage System

The Repertoire of Desaturases for Unsaturated Fatty Acid Synthesis in 397 Genomes

The repertoire of desaturases and elongases reveals fatty acid variations in 56 eukaryotic genomess

Comparative Analysis of Rab GTPases and SNAREs in Eukaryotic Genomes

The Construction of a Database for Ubiquitin Signaling Cascade

Analysis of Domain Combinations in Eukaryotic Genomes

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