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Landscape Genetics: Concepts, Methods, Applications

Niko Balkenhol, Samuel Cushman, Andrew Storfer, Lisette Waits

1, 2015

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A Comparative Analysis of Genetic Diversity and Structure in Jaguars (Panthera onca), Pumas (Puma concolor), and Ocelots (Leopardus pardalis) in Fragmented Landscapes of a Critical Mesoamerican Linkage Zone

PloS one, 2016-03, Vol.11 (3), p.e0151043-e0151043

2016

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Assessment of genetic diversity, population structure, and gene flow of tigers (Panthera tigris tigris) across Nepal's Terai Arc Landscape

PloS one, 2018-03, Vol.13 (3), p.e0193495-e0193495

2018

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Statistical approaches in landscape genetics: an evaluation of methods for linking landscape and genetic data

Ecography (Copenhagen), 2009-10, Vol.32 (5), p.818-830

2009

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Phylogeography, genetic diversity, and connectivity of brown bear populations in Central Asia

PloS one, 2019-08, Vol.14 (8), p.e0220746

2019

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Future‐proofing the koala: Synergising genomic and environmental data for effective species management

Molecular ecology, 2022-06, Vol.31 (11), p.3035-3055

2022

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To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations

Molecular ecology, 2008-09, Vol.17 (17), p.3808-3817

2008

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Genetic health and population monitoring of two small black bear (Ursus americanus) populations in Alabama, with a regional perspective of genetic diversity and exchange

PloS one, 2017-11, Vol.12 (11), p.e0186701-e0186701

2017

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Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout

Molecular ecology, 2023-02, Vol.32 (4), p.800-818

2023

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Applications of landscape genetics in conservation biology: concepts and challenges

Conservation genetics, 2010-04, Vol.11 (2), p.375-385

2010

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Effects of breeder turnover and harvest on group composition and recruitment in a social carnivore

The Journal of animal ecology, 2017-09, Vol.86 (5), p.1094-1101

2017

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Wolverine gene flow across a narrow climatic niche

Ecology (Durham), 2009-11, Vol.90 (11), p.3222-3232

2009

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Nuclear and Mitochondrial DNA Analyses of Golden Eagles (Aquila chrysaetos canadensis) from Three Areas in Western North America; Initial Results and Conservation Implications

PloS one, 2016-10, Vol.11 (10), p.e0164248-e0164248

2016

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Evaluating otter reintroduction outcomes using genetic spatial capture–recapture modified for dendritic networks

Ecology and evolution, 2021-11, Vol.11 (21), p.15047-15061

2021

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Quantification and reduction of bias from sampling larvae to infer population and landscape genetic structure

Molecular ecology resources, 2010-03, Vol.10 (2), p.304-313

2010

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Assessing the prevalence of hybridization between sympatric Canis species surrounding the red wolf (Canis rufus) recovery area in North Carolina

Molecular ecology, 2011-05, Vol.20 (10), p.2142-2156

2011

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Genetic analysis of harvest samples reveals population structure in a highly mobile generalist carnivore

Ecology and evolution, 2024-05, Vol.14 (5), p.e11411-n/a

2024

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Development and validation of a GT‐seq panel for genetic monitoring in a threatened species using minimally invasive sampling

Ecology and evolution, 2024-05, Vol.14 (5), p.e11321-n/a

2024

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Evaluating the ability of Bayesian clustering methods to detect hybridization and introgression using an empirical red wolf data set

Molecular ecology, 2013-01, Vol.22 (1), p.74-86

2013

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A long-term population monitoring approach for a wide-ranging carnivore: Noninvasive genetic sampling of gray wolf rendezvous sites in Idaho, USA

The Journal of wildlife management, 2014-08, Vol.78 (6), p.1040-1049

2014

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Range‐wide evolutionary relationships and historical demography of brown bears (Ursus arctos) revealed by whole‐genome sequencing of isolated central Asian populations

Molecular ecology, 2023-09, Vol.32 (18), p.5156-5169

2023

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Efficient, Noninvasive Genetic Sampling for Monitoring Reintroduced Wolves

The Journal of wildlife management, 2010-07, Vol.74 (5), p.1050-1058

2010

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Comparing opportunistic and systematic sampling methods for non-invasive genetic monitoring of a small translocated brown bear population

The Journal of applied ecology, 2010-02, Vol.47 (1), p.172-181

2010

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Evaluating effective population size and genetic diversity of a declining kit fox population using contemporary and historical specimens

Ecology and evolution, 2018-12, Vol.8 (23), p.12011-12021

2018

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Genetic Diversity and Divergence among Bighorn Sheep from Reintroduced Herds in Washington and Idaho

The Journal of wildlife management, 2021-08, Vol.85 (6), p.1214-1231

2021

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Landscape Genetics: Concepts, Methods, Applications

A Comparative Analysis of Genetic Diversity and Structure in Jaguars (Panthera onca), Pumas (Puma concolor), and Ocelots (Leopardus pardalis) in Fragmented Landscapes of a Critical Mesoamerican Linkage Zone

Assessment of genetic diversity, population structure, and gene flow of tigers (Panthera tigris tigris) across Nepal's Terai Arc Landscape

Statistical approaches in landscape genetics: an evaluation of methods for linking landscape and genetic data

Phylogeography, genetic diversity, and connectivity of brown bear populations in Central Asia

Future‐proofing the koala: Synergising genomic and environmental data for effective species management

To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations

Genetic health and population monitoring of two small black bear (Ursus americanus) populations in Alabama, with a regional perspective of genetic diversity and exchange

Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout

Applications of landscape genetics in conservation biology: concepts and challenges

Effects of breeder turnover and harvest on group composition and recruitment in a social carnivore

Wolverine gene flow across a narrow climatic niche

Nuclear and Mitochondrial DNA Analyses of Golden Eagles (Aquila chrysaetos canadensis) from Three Areas in Western North America; Initial Results and Conservation Implications

Evaluating otter reintroduction outcomes using genetic spatial capture–recapture modified for dendritic networks

Quantification and reduction of bias from sampling larvae to infer population and landscape genetic structure

Assessing the prevalence of hybridization between sympatric Canis species surrounding the red wolf (Canis rufus) recovery area in North Carolina

Genetic analysis of harvest samples reveals population structure in a highly mobile generalist carnivore

Development and validation of a GT‐seq panel for genetic monitoring in a threatened species using minimally invasive sampling

Evaluating the ability of Bayesian clustering methods to detect hybridization and introgression using an empirical red wolf data set

A long-term population monitoring approach for a wide-ranging carnivore: Noninvasive genetic sampling of gray wolf rendezvous sites in Idaho, USA

Range‐wide evolutionary relationships and historical demography of brown bears (Ursus arctos) revealed by whole‐genome sequencing of isolated central Asian populations

Efficient, Noninvasive Genetic Sampling for Monitoring Reintroduced Wolves

Comparing opportunistic and systematic sampling methods for non-invasive genetic monitoring of a small translocated brown bear population

Evaluating effective population size and genetic diversity of a declining kit fox population using contemporary and historical specimens

Genetic Diversity and Divergence among Bighorn Sheep from Reintroduced Herds in Washington and Idaho

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