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Landscape Genetics: Concepts, Methods, Applications

Niko Balkenhol, Samuel Cushman, Andrew Storfer, Lisette Waits

1, 2015

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NONINVASIVE GENETIC SAMPLING TOOLS FOR WILDLIFE BIOLOGISTS: A REVIEW OF APPLICATIONS AND RECOMMENDATIONS FOR ACCURATE DATA COLLECTION

The Journal of wildlife management, 2005-10, Vol.69 (4), p.1419-1433

2005

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Factors influencing detection of eDNA from a stream-dwelling amphibian

Molecular ecology resources, 2014-01, Vol.14 (1), p.109-116

2014

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Molecular road ecology: exploring the potential of genetics for investigating transportation impacts on wildlife

Molecular ecology, 2009-10, Vol.18 (20), p.4151-4164

2009

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Environmental DNA as a new method for early detection of New Zealand mudsnails ( Potamopyrgus antipodarum )

Freshwater science, 2013-09, Vol.32 (3), p.792-800

2013

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Using environmental DNA methods to improve detectability in a hellbender (Cryptobranchus alleganiensis) monitoring program

Biological conservation, 2015-03, Vol.183, p.38-45

2015

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Landscape genetics: where are we now

Molecular ecology, 2010-09, Vol.19 (17), p.3496-3514

2010

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Critical considerations for the application of environmental DNA methods to detect aquatic species

Methods in ecology and evolution, 2016-11, Vol.7 (11), p.1299-1307

2016

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Statistical approaches in landscape genetics: an evaluation of methods for linking landscape and genetic data

Ecography (Copenhagen), 2009-10, Vol.32 (5), p.818-830

2009

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Factors influencing red wolf–coyote hybridization in eastern North Carolina, USA

Biological conservation, 2015-04, Vol.184, p.108-116

2015

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Detection criteria and post-field sample processing influence results and cost efficiency of occupancy-based monitoring

Ecological applications, 2021-10, Vol.31 (7), p.1-16

2021

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Comparative landscape genetics of two frugivorous bats in a biological corridor undergoing agricultural intensification

Molecular ecology, 2017-09, Vol.26 (18), p.4603-4617

2017

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Future‐proofing the koala: Synergising genomic and environmental data for effective species management

Molecular ecology, 2022-06, Vol.31 (11), p.3035-3055

2022

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Feeding ecological knowledge: the underutilised power of faecal DNA approaches for carnivore diet analysis

Mammal review, 2019-04, Vol.49 (2), p.97-112

2019

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To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations

Molecular ecology, 2008-09, Vol.17 (17), p.3808-3817

2008

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Noninvasive individual and species identification of jaguars (Panthera onca), pumas (Puma concolor) and ocelots (Leopardus pardalis) in Belize, Central America using cross‐species microsatellites and faecal DNA

Molecular ecology resources, 2014-11, Vol.14 (6), p.1171-1182

2014

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Monitoring coyote population dynamics with fecal DNA and spatial capture-recapture

The Journal of wildlife management, 2016-07, Vol.80 (5), p.824-836

2016

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Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout

Molecular ecology, 2023-02, Vol.32 (4), p.800-818

2023

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A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RADseq data

Molecular ecology resources, 2018-11, Vol.18 (6), p.1263-1281

2018

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Efficient single-survey estimation of carnivore density using fecal DNA and spatial capture-recapture: a bobcat case study

Population ecology, 2018-07, Vol.60 (3), p.197-209

2018

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Estimating Coyote Densities with Local, Discrete Bayesian Capture-Recapture Models

The Journal of wildlife management, 2021-01, Vol.85 (1), p.73-86

2021

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Effects of breeder turnover and harvest on group composition and recruitment in a social carnivore

The Journal of animal ecology, 2017-09, Vol.86 (5), p.1094-1101

2017

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Estimating Sonoran pronghorn abundance and survival with fecal DNA and capture-recapture methods

Conservation biology, 2016-10, Vol.30 (5), p.1102-1111

2016

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Wolverine gene flow across a narrow climatic niche

Ecology (Durham), 2009-11, Vol.90 (11), p.3222-3232

2009

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The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern

Molecular ecology, 2021-10, Vol.30 (19), p.4673-4694

2021

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Landscape Genetics: Concepts, Methods, Applications

NONINVASIVE GENETIC SAMPLING TOOLS FOR WILDLIFE BIOLOGISTS: A REVIEW OF APPLICATIONS AND RECOMMENDATIONS FOR ACCURATE DATA COLLECTION

Factors influencing detection of eDNA from a stream-dwelling amphibian

Molecular road ecology: exploring the potential of genetics for investigating transportation impacts on wildlife

Environmental DNA as a new method for early detection of New Zealand mudsnails ( Potamopyrgus antipodarum )

Using environmental DNA methods to improve detectability in a hellbender (Cryptobranchus alleganiensis) monitoring program

Landscape genetics: where are we now

Critical considerations for the application of environmental DNA methods to detect aquatic species

Statistical approaches in landscape genetics: an evaluation of methods for linking landscape and genetic data

Factors influencing red wolf–coyote hybridization in eastern North Carolina, USA

Detection criteria and post-field sample processing influence results and cost efficiency of occupancy-based monitoring

Comparative landscape genetics of two frugivorous bats in a biological corridor undergoing agricultural intensification

Future‐proofing the koala: Synergising genomic and environmental data for effective species management

Feeding ecological knowledge: the underutilised power of faecal DNA approaches for carnivore diet analysis

To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations

Noninvasive individual and species identification of jaguars (Panthera onca), pumas (Puma concolor) and ocelots (Leopardus pardalis) in Belize, Central America using cross‐species microsatellites and faecal DNA

Monitoring coyote population dynamics with fecal DNA and spatial capture-recapture

Whole genome resequencing identifies local adaptation associated with environmental variation for redband trout

A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RADseq data

Efficient single-survey estimation of carnivore density using fecal DNA and spatial capture-recapture: a bobcat case study

Estimating Coyote Densities with Local, Discrete Bayesian Capture-Recapture Models

Effects of breeder turnover and harvest on group composition and recruitment in a social carnivore

Estimating Sonoran pronghorn abundance and survival with fecal DNA and capture-recapture methods

Wolverine gene flow across a narrow climatic niche

The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern

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