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Computational prediction of eukaryotic phosphorylation sites

Bioinformatics, 2011-11, Vol.27 (21), p.2927-2935

2011

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Length of Uninterrupted CAG, Independent of Polyglutamine Size, Results in Increased Somatic Instability, Hastening Onset of Huntington Disease

American journal of human genetics, 2019-06, Vol.104 (6), p.1116-1126

2019

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ExpansionHunter Denovo: a computational method for locating known and novel repeat expansions in short-read sequencing data

Genome Biology, 2020-04, Vol.21 (1), p.102-14, Article 102

2020

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Transcriptome analysis of response to Plasmodiophora brassicae infection in the Arabidopsis shoot and root

BMC genomics, 2018-01, Vol.19 (1), p.23-23, Article 23

2018

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Conservation of kinase-phosphorylation site pairings: Evidence for an evolutionarily dynamic phosphoproteome

PloS one, 2018-08, Vol.13 (8), p.e0202036-e0202036

2018

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Genome-wide tandem repeat expansions contribute to schizophrenia risk

Molecular psychiatry, 2022-09, Vol.27 (9), p.3692-3698

2022

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PIIKA 2: an expanded, web-based platform for analysis of kinome microarray data

PloS one, 2013-11, Vol.8 (11), p.e80837-e80837

2013

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Computational Analysis of the Predicted Evolutionary Conservation of Human Phosphorylation Sites

PloS one, 2016-04, Vol.11 (4), p.e0152809-e0152809

2016

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DAPPLE: a pipeline for the homology-based prediction of phosphorylation sites

Bioinformatics, 2013-07, Vol.29 (13), p.1693-1695

2013

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Temporal analysis of enhancers during mouse cerebellar development reveals dynamic and novel regulatory functions

eLife, 2022-08, Vol.11

2022

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Complex Autism Spectrum Disorder in a Patient with a Novel De Novo Heterozygous MYT1L Variant

Genes, 2023-11, Vol.14 (12), p.2122

2023

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Divergent Immune Responses to Mycobacterium avium subsp. paratuberculosis Infection Correlate with Kinome Responses at the Site of Intestinal Infection

Infection and Immunity, 2013-08, Vol.81 (8), p.2861-2872

2013

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Induction of tissue- and stressor-specific kinomic responses in chickens exposed to hot and cold stresses

Poultry science, 2015-06, Vol.94 (6), p.1333-1345

2015

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An Epigenetically Distinct Subset of Children With Autism Spectrum Disorder Resulting From Differences in Blood Cell Composition

Frontiers in neurology, 2021-04, Vol.12, p.612817

2021

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Investigation of the cause of geographic disparities in IDEXX ELISA sensitivity in serum samples from Mycobacterium bovis-infected cattle

Scientific reports, 2016-03, Vol.6 (1), p.22763-22763, Article 22763

2016

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Complex Autism Spectrum Disorder with Epilepsy, Strabismus and Self-Injurious Behaviors in a Patient with a De Novo Heterozygous POLR2A Variant

Genes, 2022-03, Vol.13 (3), p.470

2022

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Activation of the Anaphase Promoting Complex Reverses Multiple Drug Resistant Cancer in a Canine Model of Multiple Drug Resistant Lymphoma

Cancers, 2022-08, Vol.14 (17), p.4215

2022

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Comparing the similarity of different groups of bacteria to the human proteome

PloS one, 2012-04, Vol.7 (4), p.e34007-e34007

2012

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Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights

Bioinformatics, 2013-03, Vol.29 (6), p.686-694

2013

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Correction: PIIKA 2: An Expanded, Web-Based Platform for Analysis of Kinome Microarray Data

PloS one, 2014-01, Vol.9 (1)

2014

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Pentamers not found in the universal proteome can enhance antigen specific immune responses and adjuvant vaccines

PloS one, 2012-08, Vol.7 (8), p.e43802-e43802

2012

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W55. REGIONAL BURDEN ANALYSIS OF FUNCTIONAL VARIANTS REVEALS GENOMIC HOTSPOTS ENRICHED FOR REGULATORY ELEMENTS AND OVERLAPPING WITH RECURRENT PATHOGENIC CNVS

European neuropsychopharmacology, 2023-10, Vol.75, p.S132-S133

2023

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The oligodeoxynucleotide sequences corresponding to never-expressed peptide motifs are mainly located in the non-coding strand

BMC bioinformatics, 2010-07, Vol.11 (1), p.383-383, Article 383

2010

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No human protein is exempt from bacterial motifs, not even one

Self/nonself, 2010-10, Vol.1 (4), p.328-334

2010

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Computational prediction of eukaryotic phosphorylation sites

Length of Uninterrupted CAG, Independent of Polyglutamine Size, Results in Increased Somatic Instability, Hastening Onset of Huntington Disease

ExpansionHunter Denovo: a computational method for locating known and novel repeat expansions in short-read sequencing data

Transcriptome analysis of response to Plasmodiophora brassicae infection in the Arabidopsis shoot and root

Conservation of kinase-phosphorylation site pairings: Evidence for an evolutionarily dynamic phosphoproteome

Genome-wide tandem repeat expansions contribute to schizophrenia risk

PIIKA 2: an expanded, web-based platform for analysis of kinome microarray data

Computational Analysis of the Predicted Evolutionary Conservation of Human Phosphorylation Sites

DAPPLE: a pipeline for the homology-based prediction of phosphorylation sites

Temporal analysis of enhancers during mouse cerebellar development reveals dynamic and novel regulatory functions

Complex Autism Spectrum Disorder in a Patient with a Novel De Novo Heterozygous MYT1L Variant

Divergent Immune Responses to Mycobacterium avium subsp. paratuberculosis Infection Correlate with Kinome Responses at the Site of Intestinal Infection

Induction of tissue- and stressor-specific kinomic responses in chickens exposed to hot and cold stresses

An Epigenetically Distinct Subset of Children With Autism Spectrum Disorder Resulting From Differences in Blood Cell Composition

Investigation of the cause of geographic disparities in IDEXX ELISA sensitivity in serum samples from Mycobacterium bovis-infected cattle

Complex Autism Spectrum Disorder with Epilepsy, Strabismus and Self-Injurious Behaviors in a Patient with a De Novo Heterozygous POLR2A Variant

Activation of the Anaphase Promoting Complex Reverses Multiple Drug Resistant Cancer in a Canine Model of Multiple Drug Resistant Lymphoma

Comparing the similarity of different groups of bacteria to the human proteome

Computational phosphorylation site prediction in plants using random forests and organism-specific instance weights

Correction: PIIKA 2: An Expanded, Web-Based Platform for Analysis of Kinome Microarray Data

A recurrent SHANK3 frameshift variant in Autism Spectrum Disorder

Pentamers not found in the universal proteome can enhance antigen specific immune responses and adjuvant vaccines

W55. REGIONAL BURDEN ANALYSIS OF FUNCTIONAL VARIANTS REVEALS GENOMIC HOTSPOTS ENRICHED FOR REGULATORY ELEMENTS AND OVERLAPPING WITH RECURRENT PATHOGENIC CNVS

The oligodeoxynucleotide sequences corresponding to never-expressed peptide motifs are mainly located in the non-coding strand

No human protein is exempt from bacterial motifs, not even one

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