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Acetic Acid Ion Pairing Additive for Reversed-Phase HPLC Improves Detection Sensitivity in Bottom-up Proteomics Compared to Formic Acid

Journal of proteome research, 2023-01, Vol.22 (1), p.272-278

2023

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Peptide retention time prediction in hydrophilic interaction liquid chromatography. Comparison of separation selectivity between bare silica and bonded stationary phases

Journal of Chromatography A, 2018-01, Vol.1534, p.75-84

2018

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Whole blood microRNA expression pattern differentiates patients with rheumatoid arthritis, their seropositive first-degree relatives, and healthy unrelated control subjects

Arthritis research & therapy, 2017-11, Vol.19 (1), p.249-249, Article 249

2017

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Confident Identification of Citrullination and Carbamylation Assisted by Peptide Retention Time Prediction

Journal of proteome research, 2021-03, Vol.20 (3), p.1571-1581

2021

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Inhaled diesel exhaust alters the allergen-induced bronchial secretome in humans

The European respiratory journal, 2018-01, Vol.51 (1), p.1701385-1701385

2018

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Zika Virus Infection of Sertoli Cells Alters Protein Expression Involved in Activated Immune and Antiviral Response Pathways, Carbohydrate Metabolism and Cardiovascular Disease

Viruses, 2022-02, Vol.14 (2), p.377

2022

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Temporal proteomic analyses of human lung cells distinguish high pathogenicity influenza viruses and coronaviruses from low pathogenicity viruses

Frontiers in microbiology, 2022-10, Vol.13, p.994512-994512

2022

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Exploring the variable space of shallow machine learning models for reversed-phase retention time prediction

Computational and structural biotechnology journal, 2023-01, Vol.21, p.2446-2453

2023

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The proteome of extracellular vesicles released by clastic cells differs based on their substrate

PloS one, 2019-07, Vol.14 (7), p.e0219602-e0219602

2019

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Sex Dimorphism of Allergen-Induced Secreted Proteins in Murine and Human Lungs

Frontiers in immunology, 2022-06, Vol.13, p.923986-923986

2022

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Slow Off-Rate Modified Aptamer (SOMAmer) Proteomic Analysis of Patient-Derived Malignant Glioma Identifies Distinct Cellular Proteomes

International journal of molecular sciences, 2021-09, Vol.22 (17), p.9566

2021

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Combination of IL-17A/F and TNF-α uniquely alters the bronchial epithelial cell proteome to enhance proteins that augment neutrophil migration

Journal of inflammation (London, England), 2022-12, Vol.19 (1), p.26-26

2022

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Citrus Chlorophyllase Dynamics at Ethylene-Induced Fruit Color-Break: A Study of Chlorophyllase Expression, Posttranslational Processing Kinetics, and in Situ Intracellular Localization

Plant physiology (Bethesda), 2008-09, Vol.148 (1), p.108-118

2008

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Human host defence peptide LL-37 suppresses TNFα-mediated matrix metalloproteinases MMP9 and MMP13, in human bronchial epithelial cells

Journal of innate immunity, 2024-03, Vol.16 (1), p.203-215

2024

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Proteomic Approaches to Defining Remission and the Risk of Relapse in Rheumatoid Arthritis

Frontiers in immunology, 2021-11, Vol.12, p.729681-729681

2021

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The effect of laser profile, fluence, and spot size on sensitivity in orthogonal-injection matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

Rapid communications in mass spectrometry, 2008-09, Vol.22 (18), p.2779-2790

2008

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Evaluating the Characteristics of Reporter Ion Signal Acquired in the Orbitrap Analyzer for Isobaric Mass Tag Proteome Quantification Experiments

Journal of proteome research, 2017-05, Vol.16 (5), p.1831-1838

2017

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Interferon γ induced compositional changes in human bone marrow derived mesenchymal stem/stromal cells

Clinical proteomics, 2017-07, Vol.14 (1), p.26-26, Article 26

2017

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Cytokines IL-17, TNF and IFN-γ Alter the Expression of Antimicrobial Peptides and Proteins Disparately: A Targeted Proteomics Analysis using SOMAscan Technology

Vaccines (Basel), 2018-08, Vol.6 (3), p.51

2018

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Mass spectrometry analysis of gingival crevicular fluid in the presence of external root resorption

American journal of orthodontics and dentofacial orthopedics, 2014-06, Vol.145 (6), p.787-798

2014

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Proteomic Shifts Reflecting Oxidative Stress and Reduced Capacity for Protein Synthesis, and Alterations to Mitochondrial Membranes in Neurospora crassa Lacking VDAC

Microorganisms (Basel), 2022-01, Vol.10 (2), p.198

2022

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Integrating Proteomes for Lung Tissues and Lavage Reveals Pathways That Link Responses in Allergen-Challenged Mice

ACS omega, 2021-01, Vol.6 (2), p.1171-1189

2021

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Zika Infection Disrupts Proteins Involved in the Neurosensory System

Frontiers in cell and developmental biology, 2020-07, Vol.8, p.571-571

2020

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Analyte distributions in MALDI samples using MALDI imaging mass spectrometry

International journal of mass spectrometry, 2009-03, Vol.281 (1), p.41-51

2009

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Use of Peptide Retention Time Prediction for Protein Identification by off-line Reversed-Phase HPLC−MALDI MS/MS

Analytical chemistry (Washington), 2006-09, Vol.78 (17), p.6265-6269

2006

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Acetic Acid Ion Pairing Additive for Reversed-Phase HPLC Improves Detection Sensitivity in Bottom-up Proteomics Compared to Formic Acid

Peptide retention time prediction in hydrophilic interaction liquid chromatography. Comparison of separation selectivity between bare silica and bonded stationary phases

Whole blood microRNA expression pattern differentiates patients with rheumatoid arthritis, their seropositive first-degree relatives, and healthy unrelated control subjects

Confident Identification of Citrullination and Carbamylation Assisted by Peptide Retention Time Prediction

Inhaled diesel exhaust alters the allergen-induced bronchial secretome in humans

Zika Virus Infection of Sertoli Cells Alters Protein Expression Involved in Activated Immune and Antiviral Response Pathways, Carbohydrate Metabolism and Cardiovascular Disease

Temporal proteomic analyses of human lung cells distinguish high pathogenicity influenza viruses and coronaviruses from low pathogenicity viruses

Exploring the variable space of shallow machine learning models for reversed-phase retention time prediction

The proteome of extracellular vesicles released by clastic cells differs based on their substrate

Sex Dimorphism of Allergen-Induced Secreted Proteins in Murine and Human Lungs

Slow Off-Rate Modified Aptamer (SOMAmer) Proteomic Analysis of Patient-Derived Malignant Glioma Identifies Distinct Cellular Proteomes

Combination of IL-17A/F and TNF-α uniquely alters the bronchial epithelial cell proteome to enhance proteins that augment neutrophil migration

Citrus Chlorophyllase Dynamics at Ethylene-Induced Fruit Color-Break: A Study of Chlorophyllase Expression, Posttranslational Processing Kinetics, and in Situ Intracellular Localization

Human host defence peptide LL-37 suppresses TNFα-mediated matrix metalloproteinases MMP9 and MMP13, in human bronchial epithelial cells

Proteomic Approaches to Defining Remission and the Risk of Relapse in Rheumatoid Arthritis

The effect of laser profile, fluence, and spot size on sensitivity in orthogonal-injection matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

Evaluating the Characteristics of Reporter Ion Signal Acquired in the Orbitrap Analyzer for Isobaric Mass Tag Proteome Quantification Experiments

Interferon γ induced compositional changes in human bone marrow derived mesenchymal stem/stromal cells

Cytokines IL-17, TNF and IFN-γ Alter the Expression of Antimicrobial Peptides and Proteins Disparately: A Targeted Proteomics Analysis using SOMAscan Technology

Mass spectrometry analysis of gingival crevicular fluid in the presence of external root resorption

Proteomic Shifts Reflecting Oxidative Stress and Reduced Capacity for Protein Synthesis, and Alterations to Mitochondrial Membranes in Neurospora crassa Lacking VDAC

Integrating Proteomes for Lung Tissues and Lavage Reveals Pathways That Link Responses in Allergen-Challenged Mice

Zika Infection Disrupts Proteins Involved in the Neurosensory System

Analyte distributions in MALDI samples using MALDI imaging mass spectrometry

Use of Peptide Retention Time Prediction for Protein Identification by off-line Reversed-Phase HPLC−MALDI MS/MS

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