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The vocabulary of microbiome research: a proposal

Microbiome, 2015-07, Vol.3 (1), p.31-31, Article 31

2015

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Cervicovaginal microbiota, women's health, and reproductive outcomes

Fertility and sterility, 2018-08, Vol.110 (3), p.327-336

2018

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Vaginal Microbiome: Rethinking Health and Disease

Annual review of microbiology, 2012-01, Vol.66 (1), p.371-389

2012

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The vaginal mycobiome: A contemporary perspective on fungi in women's health and diseases

Virulence, 2017-04, Vol.8 (3), p.342-351

2017

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Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals

mBio, , Vol.6 (2), p.e00037-e00037

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Cervicovaginal microbiota and local immune response modulate the risk of spontaneous preterm delivery

Nature communications, 2019-03, Vol.10 (1), p.1305-1305, Article 1305

2019

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Chapter 8 Methods for In Silico Prediction of Microbial Polyketide and Nonribosomal Peptide Biosynthetic Pathways from DNA Sequence Data

Methods in Enzymology, 2009, Vol.458, p.181-217

2009

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Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: a cross-sectional study

Journal of translational medicine, 2012-12, Vol.10 (1), p.253-253, Article 253

2012

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Human oral microbiome and prospective risk for pancreatic cancer: a population-based nested case-control study

Gut, 2018-01, Vol.67 (1), p.120

2018

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Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research

mBio, 2018-06, Vol.9 (3)

2018

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Characterizing human lung tissue microbiota and its relationship to epidemiological and clinical features

Genome Biology, 2016-07, Vol.17 (1), p.163-163, Article 163

2016

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Evaluation of methods for the extraction and purification of DNA from the human microbiome

PloS one, 2012-03, Vol.7 (3), p.e33865-e33865

2012

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New insights in gut microbiota establishment in healthy breast fed neonates

PloS one, 2012-08, Vol.7 (8), p.e44595-e44595

2012

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Uncovering effects of antibiotics on the host and microbiota using transkingdom gene networks

Gut, 2015-11, Vol.64 (11), p.1732-1743

2015

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Associations between sexual habits, menstrual hygiene practices, demographics and the vaginal microbiome as revealed by Bayesian network analysis

PloS one, 2018-01, Vol.13 (1), p.e0191625-e0191625

2018

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Evaluation of 16S rDNA-based community profiling for human microbiome research

PloS one, 2012-06, Vol.7 (6), p.e39315-e39315

2012

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Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease

PloS one, 2012-06, Vol.7 (6), p.e39242

2012

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Global population structure and evolution of Bordetella pertussis and their relationship with vaccination

mBio, 2014-04, Vol.5 (2), p.e01074-e01074

2014

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An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

Microbiome, 2014-02, Vol.2 (1), p.6-6, Article 6

2014

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VALENCIA: a nearest centroid classification method for vaginal microbial communities based on composition

Microbiome, 2020-11, Vol.8 (1), p.166-166, Article 166

2020

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A comprehensive non-redundant gene catalog reveals extensive within-community intraspecies diversity in the human vagina

Nature communications, 2020-02, Vol.11 (1), p.940-940, Article 940

2020

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Capturing single cell genomes of active polysaccharide degraders: an unexpected contribution of Verrucomicrobia

PloS one, 2012-04, Vol.7 (4), p.e35314-e35314

2012

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Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions

mBio, 2020-07, Vol.11 (4)

2020

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Vaginal microbiome of reproductive-age women

Proceedings of the National Academy of Sciences - PNAS, 2011-03, Vol.108 (Supplement 1), p.4680-4687

2011

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The implausible "in vivo" role of hydrogen peroxide as an antimicrobial factor produced by vaginal microbiota

Microbiome, 2018-02, Vol.6 (1), p.29-29, Article 29

2018

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The vocabulary of microbiome research: a proposal

Cervicovaginal microbiota, women's health, and reproductive outcomes

Vaginal Microbiome: Rethinking Health and Disease

The vaginal mycobiome: A contemporary perspective on fungi in women's health and diseases

Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals

Cervicovaginal microbiota and local immune response modulate the risk of spontaneous preterm delivery

Chapter 8 Methods for In Silico Prediction of Microbial Polyketide and Nonribosomal Peptide Biosynthetic Pathways from DNA Sequence Data

Fecal microbial determinants of fecal and systemic estrogens and estrogen metabolites: a cross-sectional study

Human oral microbiome and prospective risk for pancreatic cancer: a population-based nested case-control study

Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research

Characterizing human lung tissue microbiota and its relationship to epidemiological and clinical features

Evaluation of methods for the extraction and purification of DNA from the human microbiome

New insights in gut microbiota establishment in healthy breast fed neonates

Uncovering effects of antibiotics on the host and microbiota using transkingdom gene networks

Associations between sexual habits, menstrual hygiene practices, demographics and the vaginal microbiome as revealed by Bayesian network analysis

Evaluation of 16S rDNA-based community profiling for human microbiome research

Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease

Global population structure and evolution of Bordetella pertussis and their relationship with vaccination

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform

VALENCIA: a nearest centroid classification method for vaginal microbial communities based on composition

A comprehensive non-redundant gene catalog reveals extensive within-community intraspecies diversity in the human vagina

Capturing single cell genomes of active polysaccharide degraders: an unexpected contribution of Verrucomicrobia

Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions

Vaginal microbiome of reproductive-age women

The implausible "in vivo" role of hydrogen peroxide as an antimicrobial factor produced by vaginal microbiota

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