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INSaFLU: an automated open web-based bioinformatics suite "from-reads" for influenza whole-genome-sequencing-based surveillance

Genome medicine, 2018-06, Vol.10 (1), p.46-46, Article 46

2018

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Hospitalization Risk Due to Respiratory Illness Associated with Genetic Variation at IFITM3 in Patients with Influenza A(H1N1)pdm09 Infection: A Case-Control Study

PloS one, 2016-06, Vol.11 (6), p.e0158181-e0158181

2016

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Respiratory infections in elderly people: Viral role in a resident population of elderly care centers in Lisbon, winter 2013–2014

International journal of infectious diseases, 2018-04, Vol.69, p.1-7

2018

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Distribution of influenza virus types by age using case-based global surveillance data from twenty-nine countries, 1999-2014

BMC infectious diseases, 2018-06, Vol.18 (1), p.269-269, Article 269

2018

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Vaccine effectiveness in preventing laboratory-confirmed influenza in primary care patients in a season of co-circulation of influenza A(H1N1)pdm09, B and drifted A(H3N2), I-MOVE Multicentre Case-Control Study, Europe 2014/15

Euro surveillance : bulletin européen sur les maladies transmissibles, 2016-02, Vol.21 (7), p.pii=30139-pii=30139

2016

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Molecular characterization of the HA gene of influenza type B viruses

Journal of medical virology, 2005-12, Vol.77 (4), p.541-549

2005

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Performance of surveillance case definitions for respiratory syncytial virus infections through the sentinel influenza surveillance system, Portugal, 2010 to 2018

Euro surveillance : bulletin européen sur les maladies transmissibles, 2019-11, Vol.24 (45), p.1

2019

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Seasonality and geographical spread of respiratory syncytial virus epidemics in 15 European countries, 2010 to 2016

Euro surveillance : bulletin européen sur les maladies transmissibles, 2018-02, Vol.23 (5), p.9

2018

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Interim 2019/20 influenza vaccine effectiveness: six European studies, September 2019 to January 2020

Euro surveillance : bulletin européen sur les maladies transmissibles, 2020-03, Vol.25 (10)

2020

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European surveillance for enterovirus D68 during the emerging North-American outbreak in 2014

Journal of clinical virology, 2015-10, Vol.71, p.1-9

2015

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Temporal Patterns of Influenza A and B in Tropical and Temperate Countries: What Are the Lessons for Influenza Vaccination?

PloS one, 2016-03, Vol.11 (3), p.e0152310-e0152310

2016

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Interim 2017/18 influenza seasonal vaccine effectiveness: combined results from five European studies

Euro surveillance : bulletin européen sur les maladies transmissibles, 2018-03, Vol.23 (9)

2018

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The European I-MOVE Multicentre 2013–2014 Case-Control Study. Homogeneous moderate influenza vaccine effectiveness against A(H1N1)pdm09 and heterogenous results by country against A(H3N2)

Vaccine, 2015-06, Vol.33 (24), p.2813-2822

2015

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Estimates of 2012/13 influenza vaccine effectiveness using the case test-negative control design with different influenza negative control groups

Vaccine, 2014-07, Vol.32 (35), p.4443-4449

2014

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Efetividade da vacina antigripal na época 2010-2011 em Portugal: resultados do projeto EuroEVA

Revista portuguesa de medicina geral e familiar, 2012-07, Vol.28 (4), p.271-284

2012

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Interim 2018/19 influenza vaccine effectiveness: six European studies, October 2018 to January 2019

Euro surveillance : bulletin européen sur les maladies transmissibles, 2019-02, Vol.24 (8)

2019

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Low 2018/19 vaccine effectiveness against influenza A(H3N2) among 15-64-year-olds in Europe: exploration by birth cohort

Euro surveillance : bulletin européen sur les maladies transmissibles, 2019-11, Vol.24 (48)

2019

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Early 2016/17 vaccine effectiveness estimates against influenza A(H3N2): I-MOVE multicentre case control studies at primary care and hospital levels in Europe

Euro surveillance : bulletin européen sur les maladies transmissibles, 2017-02, Vol.22 (7), p.1

2017

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Hospitalization Risk Due to Respiratory Illness Associated with Genetic Variation at IFITM3 in Patients with Influenza Apdm09 Infection: A Case-Control Study

PloS one, 2016-06, Vol.11 (6)

2016

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Virological surveillance of influenza viruses in the WHO European Region in 2019/20 - impact of the COVID-19 pandemic

Euro surveillance : bulletin européen sur les maladies transmissibles, 2020-11, Vol.25 (46), p.1

2020

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Age-specific differences in influenza virus type and subtype distribution in the 2012/2013 season in 12 European countries

Epidemiology and infection, 2015-10, Vol.143 (14), p.2950-2958

2015

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Predominance of influenza virus A(H3N2) 3C.2a1b and A(H1N1)pdm09 6B.1A5A genetic subclades in the WHO European Region, 2018–2019

Vaccine, 2020-07, Vol.38 (35), p.5707-5717

2020

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Epidemiology and genetic variability of respiratory syncytial virus in Portugal, 2014–2018

Journal of clinical virology, 2019-12, Vol.121, p.104200-104200, Article 104200

2019

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Start of the 2014/15 influenza season in Europe: drifted influenza A(H3N2) viruses circulate as dominant subtype

Euro surveillance : bulletin européen sur les maladies transmissibles, 2015-01, Vol.20 (4), p.1

2015

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INSaFLU: an automated open web-based bioinformatics suite "from-reads" for influenza whole-genome-sequencing-based surveillance

I-MOVE multi-centre case control study 2010-11: overall and stratified estimates of influenza vaccine effectiveness in Europe

Hospitalization Risk Due to Respiratory Illness Associated with Genetic Variation at IFITM3 in Patients with Influenza A(H1N1)pdm09 Infection: A Case-Control Study

Respiratory infections in elderly people: Viral role in a resident population of elderly care centers in Lisbon, winter 2013–2014

Distribution of influenza virus types by age using case-based global surveillance data from twenty-nine countries, 1999-2014

Vaccine effectiveness in preventing laboratory-confirmed influenza in primary care patients in a season of co-circulation of influenza A(H1N1)pdm09, B and drifted A(H3N2), I-MOVE Multicentre Case-Control Study, Europe 2014/15

Molecular characterization of the HA gene of influenza type B viruses

Performance of surveillance case definitions for respiratory syncytial virus infections through the sentinel influenza surveillance system, Portugal, 2010 to 2018

Seasonality and geographical spread of respiratory syncytial virus epidemics in 15 European countries, 2010 to 2016

Interim 2019/20 influenza vaccine effectiveness: six European studies, September 2019 to January 2020

European surveillance for enterovirus D68 during the emerging North-American outbreak in 2014

Temporal Patterns of Influenza A and B in Tropical and Temperate Countries: What Are the Lessons for Influenza Vaccination?

Interim 2017/18 influenza seasonal vaccine effectiveness: combined results from five European studies

The European I-MOVE Multicentre 2013–2014 Case-Control Study. Homogeneous moderate influenza vaccine effectiveness against A(H1N1)pdm09 and heterogenous results by country against A(H3N2)

Estimates of 2012/13 influenza vaccine effectiveness using the case test-negative control design with different influenza negative control groups

Efetividade da vacina antigripal na época 2010-2011 em Portugal: resultados do projeto EuroEVA

Interim 2018/19 influenza vaccine effectiveness: six European studies, October 2018 to January 2019

Low 2018/19 vaccine effectiveness against influenza A(H3N2) among 15-64-year-olds in Europe: exploration by birth cohort

Early 2016/17 vaccine effectiveness estimates against influenza A(H3N2): I-MOVE multicentre case control studies at primary care and hospital levels in Europe

Hospitalization Risk Due to Respiratory Illness Associated with Genetic Variation at IFITM3 in Patients with Influenza Apdm09 Infection: A Case-Control Study

Virological surveillance of influenza viruses in the WHO European Region in 2019/20 - impact of the COVID-19 pandemic

Age-specific differences in influenza virus type and subtype distribution in the 2012/2013 season in 12 European countries

Predominance of influenza virus A(H3N2) 3C.2a1b and A(H1N1)pdm09 6B.1A5A genetic subclades in the WHO European Region, 2018–2019

Epidemiology and genetic variability of respiratory syncytial virus in Portugal, 2014–2018

Start of the 2014/15 influenza season in Europe: drifted influenza A(H3N2) viruses circulate as dominant subtype

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