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The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies

PLoS computational biology, 2020-06, Vol.16 (6), p.e1007981-e1007981

2020

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RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor

PLoS computational biology, 2018-10, Vol.14 (10), p.e1006541-e1006541

2018

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Microbial co-occurrence relationships in the human microbiome

PLoS computational biology, 2012-07, Vol.8 (7), p.e1002606-e1002606

2012

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Predicting network activity from high throughput metabolomics

PLoS computational biology, 2013-07, Vol.9 (7), p.e1003123-e1003123

2013

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A recent origin of Orf3a from M protein across the coronavirus lineage arising by sharp divergence

Computational and structural biotechnology journal, 2020-01, Vol.18, p.4093-4102

Ouzounis, Christos A.

2020

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Ten years of pathway analysis: current approaches and outstanding challenges

PLoS computational biology, 2012-02, Vol.8 (2), p.e1002375-e1002375

2012

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Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion

mBio, 2021-01, Vol.12 (1)

2021

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The N-pact factor: evaluating the quality of empirical journals with respect to sample size and statistical power

PloS one, 2014-10, Vol.9 (10), p.e109019-e109019

2014

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Mass Media and the Contagion of Fear: The Case of Ebola in America

PloS one, 2015-06, Vol.10 (6), p.e0129179-e0129179

2015

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PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph

PLoS computational biology, 2020-03, Vol.16 (3), p.e1007732-e1007732

2020

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Fast computation and applications of genome mappability

PloS one, 2012-01, Vol.7 (1), p.e30377-e30377

2012

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Rise and demise of bioinformatics? Promise and progress

PLoS computational biology, 2012-04, Vol.8 (4), p.e1002487-e1002487

2012

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Statistical methods for detecting differentially abundant features in clinical metagenomic samples

PLoS computational biology, 2009-04, Vol.5 (4), p.e1000352-e1000352

2009

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CGG toolkit: Software components for computational genomics

PLoS computational biology, 2023-11, Vol.19 (11), p.e1011498-e1011498

2023

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How the scientific community reacts to newly submitted preprints: article downloads, Twitter mentions, and citations

PloS one, 2012-11, Vol.7 (11), p.e47523-e47523

2012

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The altmetrics collection

PloS one, 2012-11, Vol.7 (11), p.e48753-e48753

2012

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Dominance and leadership in research activities: Collaboration between countries of differing human development is reflected through authorship order and designation as corresponding authors in scientific publications

PloS one, 2017-08, Vol.12 (8), p.e0182513-e0182513

2017

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Classification and adaptive behavior prediction of children with autism spectrum disorder based upon multivariate data analysis of markers of oxidative stress and DNA methylation

PLoS computational biology, 2017-03, Vol.13 (3), p.e1005385-e1005385

2017

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Fast reconstruction of compact context-specific metabolic network models

PLoS computational biology, 2014-01, Vol.10 (1), p.e1003424-e1003424

2014

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A novel bibliometric index with a simple geometric interpretation

PloS one, 2018-07, Vol.13 (7), p.e0200098-e0200098

2018

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A systematic computational analysis of biosynthetic gene cluster evolution: lessons for engineering biosynthesis

PLoS computational biology, 2014-12, Vol.10 (12), p.e1004016-e1004016

2014

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Predicting functions of proteins in mouse based on weighted protein-protein interaction network and protein hybrid properties

PloS one, 2011-01, Vol.6 (1), p.e14556-e14556

2011

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A Strong Seasonality Pattern for Covid-19 Incidence Rates Modulated by UV Radiation Levels

Viruses, 2021-03, Vol.13 (4), p.574

2021

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Fair ranking of researchers and research teams

PloS one, 2018-04, Vol.13 (4), p.e0195509-e0195509

2018

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Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions

PLoS computational biology, 2019-04, Vol.15 (4), p.e1006867-e1006867

2019

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The genome polishing tool POLCA makes fast and accurate corrections in genome assemblies

RAVEN 2.0: A versatile toolbox for metabolic network reconstruction and a case study on Streptomyces coelicolor

Microbial co-occurrence relationships in the human microbiome

Predicting network activity from high throughput metabolomics

A recent origin of Orf3a from M protein across the coronavirus lineage arising by sharp divergence

Ten years of pathway analysis: current approaches and outstanding challenges

Atypical Divergence of SARS-CoV-2 Orf8 from Orf7a within the Coronavirus Lineage Suggests Potential Stealthy Viral Strategies in Immune Evasion

The N-pact factor: evaluating the quality of empirical journals with respect to sample size and statistical power

Mass Media and the Contagion of Fear: The Case of Ebola in America

PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph

Fast computation and applications of genome mappability

Rise and demise of bioinformatics? Promise and progress

Statistical methods for detecting differentially abundant features in clinical metagenomic samples

CGG toolkit: Software components for computational genomics

How the scientific community reacts to newly submitted preprints: article downloads, Twitter mentions, and citations

The altmetrics collection

Dominance and leadership in research activities: Collaboration between countries of differing human development is reflected through authorship order and designation as corresponding authors in scientific publications

Classification and adaptive behavior prediction of children with autism spectrum disorder based upon multivariate data analysis of markers of oxidative stress and DNA methylation

Fast reconstruction of compact context-specific metabolic network models

A novel bibliometric index with a simple geometric interpretation

A systematic computational analysis of biosynthetic gene cluster evolution: lessons for engineering biosynthesis

Predicting functions of proteins in mouse based on weighted protein-protein interaction network and protein hybrid properties

A Strong Seasonality Pattern for Covid-19 Incidence Rates Modulated by UV Radiation Levels

Fair ranking of researchers and research teams

Increasing consensus of context-specific metabolic models by integrating data-inferred cell functions

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