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How to usefully compare homologous plant genes and chromosomes as DNA sequences

The Plant journal : for cell and molecular biology, 2008-02, Vol.53 (4), p.661-673

2008

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The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences

PLoS biology, 2016-01, Vol.14 (1), p.e1002342-e1002342

2016

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Evaluation of the impact of photoperiod and light intensity on decreasing days to maturity in winter wheat

Crop science, 2023-03, Vol.63 (2), p.812-821

2023

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SynMap2 and SynMap3D: web-based whole-genome synteny browsers

Bioinformatics (Oxford, England), 2017-07, Vol.33 (14), p.2197-2198

2017

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Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum

Nature (London), 2015-11, Vol.527 (7579), p.508-511

2015

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cis-Inhibition of Notch by Endogenous Delta Biases the Outcome of Lateral Inhibition

Current biology, 2009-08, Vol.19 (16), p.1378-1383

2009

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Screening synteny blocks in pairwise genome comparisons through integer programming

BMC bioinformatics, 2011-04, Vol.12 (1), p.102-102, Article 102

2011

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Sorghum bicolor genome and the diversification of grasses

Nature (London), 2009-01, Vol.457 (7229), p.551-556

2009

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Development of an Urban Turfgrass and Tree Carbon Calculator for Northern Temperate Climates

Sustainability (Basel, Switzerland), 2022-09, Vol.14 (19), p.12423

2022

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Knowledge Transfer and Innovation: Universities as Catalysts for Sustainable Decision Making in Industry

Sustainability (Basel, Switzerland), 2023-07, Vol.15 (14), p.11175

2023

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Following Tetraploidy in Maize, a Short Deletion Mechanism Removed Genes Preferentially from One of the Two Homeologs

PLoS biology, 2010-06, Vol.8 (6), p.e1000409

2010

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Genome-wide analysis of syntenic gene deletion in the grasses

Genome biology and evolution, 2012-01, Vol.4 (3), p.265-277

2012

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Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization

PLoS genetics, 2018-03, Vol.14 (3), p.e1007267-e1007267

2018

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An ALMA and MagAO Study of the Substellar Companion GQ Lup B

The Astrophysical journal, 2017-02, Vol.836 (2), p.223

2017

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Interdependent regulation of stereotyped and stochastic photoreceptor fates in the fly eye

Developmental biology, 2021-03, Vol.471, p.89-96

2021

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A Novel Treatment Protects Chlorella at Commercial Scale from the Predatory Bacterium Vampirovibrio chlorellavorus

Frontiers in microbiology, 2016-06, Vol.7, p.848-848

2016

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Using genomic sequencing for classical genetics in E. coli K12

PloS one, 2011-02, Vol.6 (2), p.e16717-e16717

2011

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The Agricultural Genome to Phenome Initiative (AG2PI): creating a shared vision across crop and livestock research communities

Genome Biology, 2022-01, Vol.23 (1), p.3-3, Article 3

2022

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Novel Curve Fitting Analysis of NDVI Data to Describe Turf Fertilizer Response

Agriculture (Basel), 2023-08, Vol.13 (8), p.1532

2023

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A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate

Developmental cell, 2017-04, Vol.41 (2), p.204-220.e5

2017

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Relevance of in vitro agar based screens to characterize the anti-fungal activities of bacterial endophyte communities

BMC microbiology, 2016-01, Vol.16 (6), p.8-8, Article 8

2016

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Convergent evolution of polyploid genomes from across the eukaryotic tree of life

G3 : genes - genomes - genetics, 2022-05, Vol.12 (6)

2022

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Ten simple rules to cultivate transdisciplinary collaboration in data science

PLoS computational biology, 2021-05, Vol.17 (5), p.e1008879

2021

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SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand

Genome biology and evolution, 2015-11, Vol.7 (12), p.3286-3298

2015

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Ten simple rules for organizing a data science workshop

PLoS computational biology, 2020-10, Vol.16 (10), p.e1008226-e1008226

2020

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How to usefully compare homologous plant genes and chromosomes as DNA sequences

The iPlant Collaborative: Cyberinfrastructure for Enabling Data to Discovery for the Life Sciences

Evaluation of the impact of photoperiod and light intensity on decreasing days to maturity in winter wheat

SynMap2 and SynMap3D: web-based whole-genome synteny browsers

Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum

cis-Inhibition of Notch by Endogenous Delta Biases the Outcome of Lateral Inhibition

Screening synteny blocks in pairwise genome comparisons through integer programming

Sorghum bicolor genome and the diversification of grasses

Development of an Urban Turfgrass and Tree Carbon Calculator for Northern Temperate Climates

Knowledge Transfer and Innovation: Universities as Catalysts for Sustainable Decision Making in Industry

Following Tetraploidy in Maize, a Short Deletion Mechanism Removed Genes Preferentially from One of the Two Homeologs

Genome-wide analysis of syntenic gene deletion in the grasses

Preferential retention of genes from one parental genome after polyploidy illustrates the nature and scope of the genomic conflicts induced by hybridization

An ALMA and MagAO Study of the Substellar Companion GQ Lup B

Interdependent regulation of stereotyped and stochastic photoreceptor fates in the fly eye

A Novel Treatment Protects Chlorella at Commercial Scale from the Predatory Bacterium Vampirovibrio chlorellavorus

Using genomic sequencing for classical genetics in E. coli K12

The Agricultural Genome to Phenome Initiative (AG2PI): creating a shared vision across crop and livestock research communities

Novel Curve Fitting Analysis of NDVI Data to Describe Turf Fertilizer Response

A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate

Relevance of in vitro agar based screens to characterize the anti-fungal activities of bacterial endophyte communities

Convergent evolution of polyploid genomes from across the eukaryotic tree of life

Ten simple rules to cultivate transdisciplinary collaboration in data science

SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand

Ten simple rules for organizing a data science workshop

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