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Machine learning models in electronic health records can outperform conventional survival models for predicting patient mortality in coronary artery disease

PloS one, 2018-08, Vol.13 (8), p.e0202344-e0202344

2018

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Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of Alu Elements

Cell, 2013-01, Vol.152 (3), p.453-466

2013

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Nucleosome positioning stability is a modulator of germline mutation rate variation across the human genome

Nature communications, 2020-03, Vol.11 (1), p.1363-1363, Article 1363

2020

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DNA-Binding Specificities of Human Transcription Factors

Cell, 2013-01, Vol.152 (1-2), p.327-339

2013

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Target-Specific Precision of CRISPR-Mediated Genome Editing

Molecular cell, 2019-02, Vol.73 (4), p.699-713.e6

2019

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Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis

Genome Biology, 2018-12, Vol.19 (1), p.215-23, Article 215

2018

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Protein-RNA interactions: new genomic technologies and perspectives

Nature reviews. Genetics, 2012-02, Vol.13 (2), p.77

2012

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GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data

PloS one, 2017-04, Vol.12 (4), p.e0174744-e0174744

2017

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hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1

Nature (London), 2015-03, Vol.519 (7544), p.491-494

2015

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iCLIP predicts the dual splicing effects of TIA-RNA interactions

PLoS biology, 2010-10, Vol.8 (10), p.e1000530-e1000530

2010

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Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome

PLoS genetics, 2010-02, Vol.6 (2), p.e1000846-e1000846

2010

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A census of human transcription factors: function, expression and evolution

Nature reviews. Genetics, 2009-04, Vol.10 (4), p.252-263

2009

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clipplotr -a comparative visualization and analysis tool for CLIP data

RNA (Cambridge), 2023-06, Vol.29 (6), p.715

2023

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Intron retention and nuclear loss of SFPQ are molecular hallmarks of ALS

Nature communications, 2018-05, Vol.9 (1), p.2010-15, Article 2010

2018

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Nervous System Regionalization Entails Axial Allocation before Neural Differentiation

Cell, 2018-11, Vol.175 (4), p.1105-1118.e17

2018

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Widespread FUS mislocalization is a molecular hallmark of amyotrophic lateral sclerosis

Brain (London, England : 1878), 2019-09, Vol.142 (9), p.2572-2580

2019

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iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

Nature structural & molecular biology, 2010-07, Vol.17 (7), p.909

2010

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TDP-43 condensation properties specify its RNA-binding and regulatory repertoire

Cell, 2021-09, Vol.184 (18), p.4680-4696.e22

2021

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RNA modifications detection by comparative Nanopore direct RNA sequencing

Nature communications, 2021-12, Vol.12 (1), p.7198-17, Article 7198

2021

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Intergenic RNA mainly derives from nascent transcripts of known genes

Genome Biology, 2021-05, Vol.22 (1), p.136-136, Article 136

2021

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Meta-analysis of human and mouse ALS astrocytes reveals multi-omic signatures of inflammatory reactive states

Genome research, 2022-01, Vol.32 (1), p.71

2022

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Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

Nature genetics, 2015-06, Vol.47 (6), p.598-606

2015

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Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing

Cell, 2018-08, Vol.174 (5), p.1067-1081.e17

2018

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RNA polymerase II-associated proteins reveal pathways affected in VCP-related amyotrophic lateral sclerosis

Brain (London, England : 1878), 2023-06, Vol.146 (6), p.2547-2556

2023

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High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

Genome Biology, 2021-01, Vol.22 (1), p.34-34, Article 34

2021

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Machine learning models in electronic health records can outperform conventional survival models for predicting patient mortality in coronary artery disease

Direct Competition between hnRNP C and U2AF65 Protects the Transcriptome from the Exonization of Alu Elements

Nucleosome positioning stability is a modulator of germline mutation rate variation across the human genome

DNA-Binding Specificities of Human Transcription Factors

Target-Specific Precision of CRISPR-Mediated Genome Editing

Genomic landscape of oxidative DNA damage and repair reveals regioselective protection from mutagenesis

Protein-RNA interactions: new genomic technologies and perspectives

GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data

hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1

iCLIP predicts the dual splicing effects of TIA-RNA interactions

Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome

A census of human transcription factors: function, expression and evolution

clipplotr -a comparative visualization and analysis tool for CLIP data

Intron retention and nuclear loss of SFPQ are molecular hallmarks of ALS

Nervous System Regionalization Entails Axial Allocation before Neural Differentiation

Widespread FUS mislocalization is a molecular hallmark of amyotrophic lateral sclerosis

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution

TDP-43 condensation properties specify its RNA-binding and regulatory repertoire

RNA modifications detection by comparative Nanopore direct RNA sequencing

Intergenic RNA mainly derives from nascent transcripts of known genes

Meta-analysis of human and mouse ALS astrocytes reveals multi-omic signatures of inflammatory reactive states

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing

RNA polymerase II-associated proteins reveal pathways affected in VCP-related amyotrophic lateral sclerosis

High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

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