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MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

PloS one, 2022-05, Vol.17 (5), p.e0267066

2022

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NanoCoV19: An analytical pipeline for rapid detection of severe acute respiratory syndrome coronavirus 2

Frontiers in genetics, 2022-09, Vol.13, p.1008792

Lang, Jidong

2022

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Inhalable Microorganisms in Beijing’s PM2.5 and PM10 Pollutants during a Severe Smog Event

Environmental science & technology, 2014-02, Vol.48 (3), p.1499-1507

2014

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Scleral hypoxia is a target for myopia control

Proceedings of the National Academy of Sciences - PNAS, 2018-07, Vol.115 (30), p.E7091-E7100

2018

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Optimized DNA extraction and metagenomic sequencing of airborne microbial communities

Nature protocols, 2015-05, Vol.10 (5), p.768-779

2015

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An Improved Anticancer Drug-Response Prediction Based on an Ensemble Method Integrating Matrix Completion and Ridge Regression

Molecular therapy. Nucleic acids, 2020-09, Vol.21, p.676-686

2020

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TOOme: A Novel Computational Framework to Infer Cancer Tissue-of-Origin by Integrating Both Gene Mutation and Expression

Frontiers in bioengineering and biotechnology, 2020-05, Vol.8, p.394-394

2020

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Research of cervical microbiota alterations with human papillomavirus infection status and women age in Sanmenxia area of China

Frontiers in microbiology, 2022-10, Vol.13, p.1004664-1004664

2022

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Cervical Cancer Metastasis and Recurrence Risk Prediction Based on Deep Convolutional Neural Network

Current bioinformatics, 2022-02, Vol.17 (2), p.164-173

2022

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Editorial: Applications of RNA-seq in cancer and tumor research

Frontiers in genetics, 2023-11, Vol.14, p.1331576-1331576

2023

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Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies

BMC genomics, 2022-04, Vol.23 (Suppl 1), p.316-15, Article 316

2022

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Identifying Potential miRNAs-Disease Associations With Probability Matrix Factorization

Frontiers in genetics, 2019-12, Vol.10, p.1234-1234

2019

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A New Method for CTC Images Recognition Based on Machine Learning

Frontiers in bioengineering and biotechnology, 2020-08, Vol.8, p.897-897

2020

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Editorial: Bioinformatics analysis tools for nanopore sequencing and applications

Frontiers in bioengineering and biotechnology, 2023-03, Vol.11, p.1189769-1189769

2023

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Accurate Detection of HPV Integration Sites in Cervical Cancer Samples Using the Nanopore MinION Sequencer Without Error Correction

Frontiers in genetics, 2020-06, Vol.11

2020

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Simultaneous detection and comprehensive analysis of HPV and microbiome status of a cervical liquid-based cytology sample using Nanopore MinION sequencing

Scientific reports, 2019-12, Vol.9 (1), p.19337-13, Article 19337

2019

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Evaluation of the MGISEQ-2000 Sequencing Platform for Illumina Target Capture Sequencing Libraries

Frontiers in genetics, 2021-10, Vol.12, p.730519-730519

2021

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NanoSTR: A method for detection of target short tandem repeats based on nanopore sequencing data

Frontiers in molecular biosciences, 2023-01, Vol.10, p.1093519-1093519

2023

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A Neural Network Framework for Predicting the Tissue-of-Origin of 15 Common Cancer Types Based on RNA-Seq Data

Frontiers in bioengineering and biotechnology, 2020-08, Vol.8, p.737

2020

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Systematic Reconstruction of Molecular Cascades Regulating GP Development Using Single-Cell RNA-Seq

Cell reports (Cambridge), 2016-05, Vol.15 (7), p.1467-1480

2016

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Genomic Profiling of Driver Gene Mutations in Chinese Patients With Non-Small Cell Lung Cancer

Frontiers in genetics, 2019-10, Vol.10, p.1008-1008

2019

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Metagenomic Human Repiratory Air in a Hospital Environment

PloS one, 2015-10, Vol.10 (10), p.e0139044-e0139044

2015

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TCM‐Suite: A comprehensive and holistic platform for Traditional Chinese Medicine component identification and network pharmacology analysis

iMeta, 2022-12, Vol.1 (4), p.e47-n/a

2022

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Monitoring microsatellite instability (MSI) in circulating tumor DNA by next-generation DNA-seq

Journal of clinical oncology, 2018-05, Vol.36 (15_suppl), p.12025-12025

2018

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Detecting TYMS Tandem Repeat Polymorphism by the PSSD Method Based on Next-generation Sequencing

Current bioinformatics, 2020-01, Vol.15 (10), p.1153-1159

2020

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MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

NanoCoV19: An analytical pipeline for rapid detection of severe acute respiratory syndrome coronavirus 2

Inhalable Microorganisms in Beijing’s PM2.5 and PM10 Pollutants during a Severe Smog Event

Scleral hypoxia is a target for myopia control

Optimized DNA extraction and metagenomic sequencing of airborne microbial communities

An Improved Anticancer Drug-Response Prediction Based on an Ensemble Method Integrating Matrix Completion and Ridge Regression

TOOme: A Novel Computational Framework to Infer Cancer Tissue-of-Origin by Integrating Both Gene Mutation and Expression

Research of cervical microbiota alterations with human papillomavirus infection status and women age in Sanmenxia area of China

Cervical Cancer Metastasis and Recurrence Risk Prediction Based on Deep Convolutional Neural Network

Editorial: Applications of RNA-seq in cancer and tumor research

Genomic and resistome analysis of Alcaligenes faecalis strain PGB1 by Nanopore MinION and Illumina Technologies

Identifying Potential miRNAs-Disease Associations With Probability Matrix Factorization

A New Method for CTC Images Recognition Based on Machine Learning

Editorial: Bioinformatics analysis tools for nanopore sequencing and applications

Accurate Detection of HPV Integration Sites in Cervical Cancer Samples Using the Nanopore MinION Sequencer Without Error Correction

Simultaneous detection and comprehensive analysis of HPV and microbiome status of a cervical liquid-based cytology sample using Nanopore MinION sequencing

Evaluation of the MGISEQ-2000 Sequencing Platform for Illumina Target Capture Sequencing Libraries

NanoSTR: A method for detection of target short tandem repeats based on nanopore sequencing data

A Neural Network Framework for Predicting the Tissue-of-Origin of 15 Common Cancer Types Based on RNA-Seq Data

Systematic Reconstruction of Molecular Cascades Regulating GP Development Using Single-Cell RNA-Seq

Genomic Profiling of Driver Gene Mutations in Chinese Patients With Non-Small Cell Lung Cancer

Metagenomic Human Repiratory Air in a Hospital Environment

TCM‐Suite: A comprehensive and holistic platform for Traditional Chinese Medicine component identification and network pharmacology analysis

Monitoring microsatellite instability (MSI) in circulating tumor DNA by next-generation DNA-seq

Detecting TYMS Tandem Repeat Polymorphism by the PSSD Method Based on Next-generation Sequencing

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