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RNAplex: a fast tool for RNA–RNA interaction search

Bioinformatics, 2008-11, Vol.24 (22), p.2657-2663

2008

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ViennaRNA Package 2.0

Algorithms for molecular biology, 2011-11, Vol.6 (1), p.26-26, Article 26

2011

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The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

Nature (London), 2014-01, Vol.505 (7484), p.546-549

2014

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From Glacier to Sauna: RNA-Seq of the Human Pathogen Black Fungus Exophiala dermatitidis under Varying Temperature Conditions Exhibits Common and Novel Fungal Response

PloS one, 2015-06, Vol.10 (6), p.e0127103-e0127103

2015

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The RNAsnp web server: predicting SNP effects on local RNA secondary structure

Nucleic acids research, 2013-07, Vol.41 (Web Server issue), p.W475

2013

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First evaluation of the microbiome of built cultural heritage by using the Ion Torrent next generation sequencing platform

International biodeterioration & biodegradation, 2018-07, Vol.131, p.11-18

2018

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Transcriptome Study of an Exophiala dermatitidis PKS1 Mutant on an ex Vivo Skin Model: Is Melanin Important for Infection?

Frontiers in microbiology, 2018-07, Vol.9, p.1457-1457

2018

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Thermodynamics of RNA–RNA binding

Bioinformatics, 2006-05, Vol.22 (10), p.1177-1182

2006

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Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

BMC genomics, 2020-04, Vol.21 (1), p.290-290, Article 290

2020

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Genomic and Morphological Evidence Converge to Resolve the Enigma of Strepsiptera

Current biology, 2012-07, Vol.22 (14), p.1309-1313

2012

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The impact of target site accessibility on the design of effective siRNAs

Nature biotechnology, 2008-05, Vol.26 (5), p.578-583

2008

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PLEXY: efficient target prediction for box C/D snoRNAs

Bioinformatics, 2011-01, Vol.27 (2), p.279-280

2011

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snoStrip: a snoRNA annotation pipeline

Bioinformatics, 2014-01, Vol.30 (1), p.115-116

2014

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Partition function and base pairing probabilities of RNA heterodimers

Algorithms for molecular biology, 2006-03, Vol.1 (1), p.3-3, Article 3

2006

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Back to the Salt Mines: Genome and Transcriptome Comparisons of the Halophilic Fungus Aspergillus salisburgensis and Its Halotolerant Relative Aspergillus sclerotialis

Genes, 2019-05, Vol.10 (5), p.381

2019

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Fast accessibility-based prediction of RNA-RNA interactions

Bioinformatics, 2011-07, Vol.27 (14), p.1934-1940

2011

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Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs

Life (Basel, Switzerland), 2018-06, Vol.8 (2), p.22

2018

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RNAsnoop: efficient target prediction for H/ACA snoRNAs

Bioinformatics, 2010-03, Vol.26 (5), p.610-616

2010

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Structured RNAs and synteny regions in the pig genome

BMC genomics, 2014-06, Vol.15 (1), p.459-459, Article 459

2014

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Functional repeat-derived RNAs often originate from retrotransposon-propagated ncRNAs

Wiley interdisciplinary reviews. RNA, 2014-09, Vol.5 (5), p.591-600

2014

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Rapid diagnosis of biological colonization in cultural artefacts using the MinION nanopore sequencing technology

International biodeterioration & biodegradation, 2020-03, Vol.148, p.104908, Article 104908

2020

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Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions

Data in brief, 2015-12, Vol.5 (C), p.372-375

2015

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Decoding the biological information contained in two ancient Slavonic parchment codices: an added historical value

Environmental microbiology, 2020-08, Vol.22 (8), p.3218-3233

2020

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Animal snoRNAs and scaRNAs with exceptional structures

RNA biology, 2011-11, Vol.8 (6), p.938-946

2011

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RNApredator: fast accessibility-based prediction of sRNA targets

Nucleic acids research, 2011-07, Vol.39 (Web Server issue), p.W149

2011

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RNAplex: a fast tool for RNA–RNA interaction search

ViennaRNA Package 2.0

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

From Glacier to Sauna: RNA-Seq of the Human Pathogen Black Fungus Exophiala dermatitidis under Varying Temperature Conditions Exhibits Common and Novel Fungal Response

The RNAsnp web server: predicting SNP effects on local RNA secondary structure

First evaluation of the microbiome of built cultural heritage by using the Ion Torrent next generation sequencing platform

Transcriptome Study of an Exophiala dermatitidis PKS1 Mutant on an ex Vivo Skin Model: Is Melanin Important for Infection?

Thermodynamics of RNA–RNA binding

Gene expression profiling identifies pathways involved in seed maturation of Jatropha curcas

Genomic and Morphological Evidence Converge to Resolve the Enigma of Strepsiptera

The impact of target site accessibility on the design of effective siRNAs

PLEXY: efficient target prediction for box C/D snoRNAs

snoStrip: a snoRNA annotation pipeline

Partition function and base pairing probabilities of RNA heterodimers

Back to the Salt Mines: Genome and Transcriptome Comparisons of the Halophilic Fungus Aspergillus salisburgensis and Its Halotolerant Relative Aspergillus sclerotialis

Fast accessibility-based prediction of RNA-RNA interactions

Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs

RNAsnoop: efficient target prediction for H/ACA snoRNAs

Structured RNAs and synteny regions in the pig genome

Functional repeat-derived RNAs often originate from retrotransposon-propagated ncRNAs

Rapid diagnosis of biological colonization in cultural artefacts using the MinION nanopore sequencing technology

Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions

Decoding the biological information contained in two ancient Slavonic parchment codices: an added historical value

Animal snoRNAs and scaRNAs with exceptional structures

RNApredator: fast accessibility-based prediction of sRNA targets

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