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An RNAi-Based Control of Fusarium graminearum Infections Through Spraying of Long dsRNAs Involves a Plant Passage and Is Controlled by the Fungal Silencing Machinery

PLoS pathogens, 2016-10, Vol.12 (10), p.e1005901-e1005901

2016

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EDGAR: a software framework for the comparative analysis of prokaryotic genomes

BMC bioinformatics, 2009-05, Vol.10 (1), p.154-154, Article 154

2009

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Curare and GenExVis: a versatile toolkit for analyzing and visualizing RNA-Seq data

BMC bioinformatics, 2024-03, Vol.25 (1), p.138-138

2024

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Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores

Microbial genomics, 2020-10, Vol.6 (10)

2020

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The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

Nature (London), 2014-01, Vol.505 (7484), p.546-549

2014

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Evolutionarily stable gene clusters shed light on the common grounds of pathogenicity in the Acinetobacter calcoaceticus-baumannii complex

PLoS genetics, 2022-06, Vol.18 (6), p.e1010020-e1010020

2022

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Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT

Environmental microbiology, 2016-12, Vol.18 (12), p.4610-4627

2016

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Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes

PloS one, 2011-10, Vol.6 (10), p.e25724-e25724

2011

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Microbial diversity in different compartments of an aquaponics system

Archives of microbiology, 2017-05, Vol.199 (4), p.613-620

2017

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A reference genome of the Chinese hamster based on a hybrid assembly strategy

Biotechnology and bioengineering, 2018-08, Vol.115 (8), p.2087-2100

2018

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Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia

Scientific reports, 2021-01, Vol.11 (1), p.1726-13, Article 1726

2021

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Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

BMC genomics, 2013-01, Vol.14 (1), p.47-47

2013

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Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing

PloS one, 2012-08, Vol.7 (8), p.e41606-e41606

2012

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Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

Journal of biotechnology, 2012-04, Vol.158 (4), p.248-258

2012

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Insect pathogenicity in plant-beneficial pseudomonads: phylogenetic distribution and comparative genomics

The ISME Journal, 2016-10, Vol.10 (10), p.2527-2542

2016

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Comparative and joint analysis of two metagenomic datasets from a biogas fermenter obtained by 454-pyrosequencing

PloS one, 2011-01, Vol.6 (1), p.e14519-e14519

2011

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Lausannevirus, a giant amoebal virus encoding histone doublets

Environmental microbiology, 2011-06, Vol.13 (6), p.1454-1466

2011

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Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica

The ISME Journal, 2016-04, Vol.10 (4), p.871-884

2016

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Pseudomonas carnis sp. nov., isolated from meat

International journal of systematic and evolutionary microbiology, 2020-03, Vol.70 (3), p.1528-1540

2020

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Chromosomal Locations of mcr-1 and blaCTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410

Emerging infectious diseases, 2016-09, Vol.22 (9), p.1689-1691

2016

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What goes around comes around: Artificial circular RNAs bypass cellular antiviral responses

Molecular therapy. Nucleic acids, 2022-06, Vol.28, p.623-635

2022

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Circulation of clonal populations of fluoroquinolone-resistant CTX-M-15-producing Escherichia coli ST410 in humans and animals in Germany

International journal of antimicrobial agents, 2016-06, Vol.47 (6), p.457-465

2016

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Comparative Genome Sequencing Reveals Within-Host Genetic Changes in Neisseria meningitidis during Invasive Disease

PloS one, 2017-01, Vol.12 (1), p.e0169892-e0169892

2017

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ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates

PLoS computational biology, 2020-03, Vol.16 (3), p.e1007134-e1007134

2020

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Construction of a public CHO cell line transcript database using versatile bioinformatics analysis pipelines

PloS one, 2014-01, Vol.9 (1), p.e85568-e85568

2014

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An RNAi-Based Control of Fusarium graminearum Infections Through Spraying of Long dsRNAs Involves a Plant Passage and Is Controlled by the Fungal Silencing Machinery

EDGAR: a software framework for the comparative analysis of prokaryotic genomes

Curare and GenExVis: a versatile toolkit for analyzing and visualizing RNA-Seq data

Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores

The genome of the recently domesticated crop plant sugar beet (Beta vulgaris)

Evolutionarily stable gene clusters shed light on the common grounds of pathogenicity in the Acinetobacter calcoaceticus-baumannii complex

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT

Bioinformatic analysis reveals high diversity of bacterial genes for laccase-like enzymes

Microbial diversity in different compartments of an aquaponics system

A reference genome of the Chinese hamster based on a hybrid assembly strategy

Phytoplankton consortia as a blueprint for mutually beneficial eukaryote-bacteria ecosystems based on the biocoenosis of Botryococcus consortia

Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome

Bacterial community shift in treated periodontitis patients revealed by ion torrent 16S rRNA gene amplicon sequencing

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

Insect pathogenicity in plant-beneficial pseudomonads: phylogenetic distribution and comparative genomics

Comparative and joint analysis of two metagenomic datasets from a biogas fermenter obtained by 454-pyrosequencing

Lausannevirus, a giant amoebal virus encoding histone doublets

Non-pathogenic Rhizobium radiobacter F4 deploys plant beneficial activity independent of its host Piriformospora indica

Pseudomonas carnis sp. nov., isolated from meat

Chromosomal Locations of mcr-1 and blaCTX-M-15 in Fluoroquinolone-Resistant Escherichia coli ST410

What goes around comes around: Artificial circular RNAs bypass cellular antiviral responses

Circulation of clonal populations of fluoroquinolone-resistant CTX-M-15-producing Escherichia coli ST410 in humans and animals in Germany

Comparative Genome Sequencing Reveals Within-Host Genetic Changes in Neisseria meningitidis during Invasive Disease

ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates

Construction of a public CHO cell line transcript database using versatile bioinformatics analysis pipelines

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