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Collective effects of long-range DNA methylations predict gene expressions and estimate phenotypes in cancer

Scientific reports, 2020-03, Vol.10 (1), p.3920-3920, Article 3920

2020

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Microarray data analysis: from disarray to consolidation and consensus

Nature reviews. Genetics, 2006-01, Vol.7 (1), p.55-65

2006

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Absorbance summation: A novel approach for analyzing high-throughput ELISA data in the absence of a standard

PloS one, 2018-06, Vol.13 (6), p.e0198528

2018

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Predicting gene expression using DNA methylation in three human populations

PeerJ (San Francisco, CA), 2019-05, Vol.7, p.e6757-e6757, Article e6757

2019

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Repeatability of published microarray gene expression analyses

Nature genetics, 2009-02, Vol.41 (2), p.149-155

2009

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JQ1 Induces DNA Damage and Apoptosis, and Inhibits Tumor Growth in a Patient-Derived Xenograft Model of Cholangiocarcinoma

Molecular cancer therapeutics, 2018-01, Vol.17 (1), p.107-118

2018

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G protein-coupled estrogen receptor regulates embryonic heart rate in zebrafish

PLoS genetics, 2017-10, Vol.13 (10), p.e1007069

2017

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Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data

Journal of mass spectrometry., 2016-07, Vol.51 (7), p.461-475

2016

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Elevated Heme Oxygenase-1 Correlates With Increased Brain Iron Deposition Measured by Quantitative Susceptibility Mapping and Decreased Hemoglobin in Patients With Parkinson's Disease

Frontiers in aging neuroscience, 2021-03, Vol.13, p.656626-656626

2021

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Length bias correction for RNA-seq data in gene set analyses

Bioinformatics (Oxford, England), 2011-03, Vol.27 (5), p.662-669

2011

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Total choline intake and working memory performance in adults with phenylketonuria

Orphanet journal of rare diseases, 2023-07, Vol.18 (1), p.222-222, Article 222

2023

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Pdgfrb is a direct regulatory target of TGFβ signaling in atrioventricular cushion mesenchymal cells

PloS one, 2017-04, Vol.12 (4), p.e0175791-e0175791

2017

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Cranial electrotherapy stimulation in veterans with fibromyalgia using neuroimaging as a biomarker

Brain stimulation, 2023-01, Vol.16 (1), p.275-275

2023

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Portion sizes for children are predicted by parental characteristics and the amounts parents serve themselves

The American journal of clinical nutrition, 2014-04, Vol.99 (4), p.763-770

2014

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Expression signature of IFN/STAT1 signaling genes predicts poor survival outcome in glioblastoma multiforme in a subtype-specific manner

PloS one, 2012-01, Vol.7 (1), p.e29653-e29653

2012

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Transforming Growth Factor Beta (TGF-β) Is a Muscle Biomarker of Disease Progression in ALS and Correlates with Smad Expression

PloS one, 2015-09, Vol.10 (9), p.e0138425-e0138425

2015

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Characterization of Choline Nutriture among Adults and Children with Phenylketonuria

Nutrients, 2022-09, Vol.14 (19), p.4056

2022

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Time-Specific Pattern of Iron Deposition in Different Regions in Parkinson's Disease Measured by Quantitative Susceptibility Mapping

Frontiers in neurology, 2021-08, Vol.12, p.631210-631210

2021

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Use of FEF25–75% to Guide IgG Dosing to Protect Pulmonary Function in CVID

Journal of clinical immunology, 2020-02, Vol.40 (2), p.310-320

2020

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Analysis of the tonsillar microbiome in young adults with sore throat reveals a high relative abundance of Fusobacterium necrophorum with low diversity

PloS one, 2018-01, Vol.13 (1), p.e0189423-e0189423

2018

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Design and validation issues in RNA-seq experiments

Briefings in bioinformatics, 2011-05, Vol.12 (3), p.280-287

2011

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Kidney Injury Accelerates Cystogenesis via Pathways Modulated by Heme Oxygenase and Complement

Journal of the American Society of Nephrology, 2012-07, Vol.23 (7), p.1161-1171

2012

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Uniform approximation is more appropriate for Wilcoxon Rank-Sum Test in gene set analysis

PloS one, 2012-02, Vol.7 (2), p.e31505-e31505

2012

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COVID-19–associated venous thromboembolism portends worse survival

Seminars in vascular surgery, 2021-09, Vol.34 (3), p.117-124

2021

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Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1

Journal of molecular medicine (Berlin, Germany), 2014-10, Vol.92 (10), p.1045-1056

2014

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Collective effects of long-range DNA methylations predict gene expressions and estimate phenotypes in cancer

Microarray data analysis: from disarray to consolidation and consensus

Absorbance summation: A novel approach for analyzing high-throughput ELISA data in the absence of a standard

Predicting gene expression using DNA methylation in three human populations

Repeatability of published microarray gene expression analyses

JQ1 Induces DNA Damage and Apoptosis, and Inhibits Tumor Growth in a Patient-Derived Xenograft Model of Cholangiocarcinoma

G protein-coupled estrogen receptor regulates embryonic heart rate in zebrafish

Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data

Elevated Heme Oxygenase-1 Correlates With Increased Brain Iron Deposition Measured by Quantitative Susceptibility Mapping and Decreased Hemoglobin in Patients With Parkinson's Disease

Length bias correction for RNA-seq data in gene set analyses

Total choline intake and working memory performance in adults with phenylketonuria

Pdgfrb is a direct regulatory target of TGFβ signaling in atrioventricular cushion mesenchymal cells

Cranial electrotherapy stimulation in veterans with fibromyalgia using neuroimaging as a biomarker

Portion sizes for children are predicted by parental characteristics and the amounts parents serve themselves

Expression signature of IFN/STAT1 signaling genes predicts poor survival outcome in glioblastoma multiforme in a subtype-specific manner

Transforming Growth Factor Beta (TGF-β) Is a Muscle Biomarker of Disease Progression in ALS and Correlates with Smad Expression

Characterization of Choline Nutriture among Adults and Children with Phenylketonuria

Time-Specific Pattern of Iron Deposition in Different Regions in Parkinson's Disease Measured by Quantitative Susceptibility Mapping

Use of FEF25–75% to Guide IgG Dosing to Protect Pulmonary Function in CVID

Analysis of the tonsillar microbiome in young adults with sore throat reveals a high relative abundance of Fusobacterium necrophorum with low diversity

Design and validation issues in RNA-seq experiments

Kidney Injury Accelerates Cystogenesis via Pathways Modulated by Heme Oxygenase and Complement

Uniform approximation is more appropriate for Wilcoxon Rank-Sum Test in gene set analysis

COVID-19–associated venous thromboembolism portends worse survival

Intragenic motifs regulate the transcriptional complexity of Pkhd1/PKHD1

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