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Linking ClinicalTrials.gov and PubMed to track results of interventional human clinical trials

PloS one, 2013-07, Vol.8 (7), p.e68409-e68409

2013

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A Learning Health Care System Using Computer-Aided Diagnosis

Journal of medical Internet research, 2017-03, Vol.19 (3), p.e54-e54

2017

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Evaluating adherence to the International Committee of Medical Journal Editors' policy of mandatory, timely clinical trial registration

Journal of the American Medical Informatics Association : JAMIA, 2013-06, Vol.20 (e1), p.e169-e174

2013

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Caveats for the Use of Operational Electronic Health Record Data in Comparative Effectiveness Research

Medical care, 2013-08, Vol.51 (8 Suppl 3), p.S30-S37

2013

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A rapid matrix-assisted laser desorption ionization-time of flight mass spectrometry-based method for single-plasmid tracking in an outbreak of carbapenem-resistant Enterobacteriaceae

Journal of clinical microbiology, 2014-08, Vol.52 (8), p.2804-2812

2014

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Impending Challenges for the Use of Big Data

International journal of radiation oncology, biology, physics, 2016-07, Vol.95 (3), p.890-894

2016

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Standardizing data exchange for clinical research protocols and case report forms: An assessment of the suitability of the Clinical Data Interchange Standards Consortium (CDISC) Operational Data Model (ODM)

Journal of biomedical informatics, 2015-10, Vol.57, p.88-99

2015

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PAGER-CoV: a comprehensive collection of pathways, annotated gene-lists and gene signatures for coronavirus disease studies

Nucleic acids research, 2021-01, Vol.49 (D1), p.D589

2021

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Biomedical Informatics: Computer Applications in Health Care and Biomedicine

Fifth edition, 2021

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Putting the “why” in “EHR”: capturing and coding clinical cognition

Journal of the American Medical Informatics Association : JAMIA, 2019-11, Vol.26 (11), p.1379-1384

Cimino, James J

2019

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Improving the electronic health record--are clinicians getting what they wished for?

JAMA : the journal of the American Medical Association, 2013-03, Vol.309 (10), p.991

Cimino, James J

2013

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Facilitating biomedical researchers’ interrogation of electronic health record data: Ideas from outside of biomedical informatics

Journal of biomedical informatics, 2016-04, Vol.60, p.376-384

2016

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Unintended Consequences of Nationwide Electronic Health Record Adoption: Challenges and Opportunities in the Post-Meaningful Use Era

Journal of medical Internet research, 2019-06, Vol.21 (6), p.e13313-e13313

2019

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Clinicians’ reasoning as reflected in electronic clinical note-entry and reading/retrieval: a systematic review and qualitative synthesis

Journal of the American Medical Informatics Association : JAMIA, 2019-02, Vol.26 (2), p.172-184

2019

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Using clinical reasoning ontologies to make smarter clinical decision support systems: a systematic review and data synthesis

Journal of the American Medical Informatics Association : JAMIA, 2020-01, Vol.27 (1), p.159-174

2020

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A Visual Analytic Tool (VIADS) to Assist the Hypothesis Generation Process in Clinical Research: Mixed Methods Usability Study

JMIR human factors, 2023-04, Vol.10, p.e44644-e44644

2023

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Data-driven hypothesis generation among inexperienced clinical researchers: A comparison of secondary data analyses with visualization (VIADS) and other tools

Journal of clinical and translational science, 2024, Vol.8 (1), p.e13-e13, Article e13

2024

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Celebrating Eta Berner and her influence on biomedical and health informatics

Journal of the American Medical Informatics Association : JAMIA, 2024-02, Vol.31 (3), p.549-551

2024

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A visual interactive analytic tool for filtering and summarizing large health data sets coded with hierarchical terminologies (VIADS)

BMC medical informatics and decision making, 2019-02, Vol.19 (1), p.31-31, Article 31

2019

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The Roles of a Secondary Data Analytics Tool and Experience in Scientific Hypothesis Generation in Clinical Research: Protocol for a Mixed Methods Study

JMIR research protocols, 2022-07, Vol.11 (7), p.e39414-e39414

2022

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Racial Disparity in Clinical Alert Overrides

AMIA ... Annual Symposium proceedings, 2021, Vol.2021, p.314-323

Cimino, James J

2021

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The biomedical informatics short course at Woods Hole/Georgia: Training to support institutional change

Information services & use, 2022, Vol.42 (1), p.47-59

Cimino, James J

2022

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Beyond the override: Using evidence of previous drug tolerance to suppress drug allergy alerts; a retrospective study of opioid alerts

Journal of biomedical informatics, 2023-11, Vol.147, p.104508-104508, Article 104508

2023

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Research informatics and the COVID-19 pandemic: Challenges, innovations, lessons learned, and recommendations

Journal of clinical and translational science, 2021, Vol.5 (1), p.e110-e110, Article e110

2021

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Improving precision medicine using individual patient data from trials

Canadian Medical Association journal (CMAJ), 2017-02, Vol.189 (5), p.E204

2017

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Linking ClinicalTrials.gov and PubMed to track results of interventional human clinical trials

A Learning Health Care System Using Computer-Aided Diagnosis

Evaluating adherence to the International Committee of Medical Journal Editors' policy of mandatory, timely clinical trial registration

Caveats for the Use of Operational Electronic Health Record Data in Comparative Effectiveness Research

A rapid matrix-assisted laser desorption ionization-time of flight mass spectrometry-based method for single-plasmid tracking in an outbreak of carbapenem-resistant Enterobacteriaceae

Impending Challenges for the Use of Big Data

Standardizing data exchange for clinical research protocols and case report forms: An assessment of the suitability of the Clinical Data Interchange Standards Consortium (CDISC) Operational Data Model (ODM)

PAGER-CoV: a comprehensive collection of pathways, annotated gene-lists and gene signatures for coronavirus disease studies

Biomedical Informatics: Computer Applications in Health Care and Biomedicine

Putting the “why” in “EHR”: capturing and coding clinical cognition

Improving the electronic health record--are clinicians getting what they wished for?

Facilitating biomedical researchers’ interrogation of electronic health record data: Ideas from outside of biomedical informatics

Unintended Consequences of Nationwide Electronic Health Record Adoption: Challenges and Opportunities in the Post-Meaningful Use Era

Clinicians’ reasoning as reflected in electronic clinical note-entry and reading/retrieval: a systematic review and qualitative synthesis

Using clinical reasoning ontologies to make smarter clinical decision support systems: a systematic review and data synthesis

A Visual Analytic Tool (VIADS) to Assist the Hypothesis Generation Process in Clinical Research: Mixed Methods Usability Study

Data-driven hypothesis generation among inexperienced clinical researchers: A comparison of secondary data analyses with visualization (VIADS) and other tools

Celebrating Eta Berner and her influence on biomedical and health informatics

A visual interactive analytic tool for filtering and summarizing large health data sets coded with hierarchical terminologies (VIADS)

The Roles of a Secondary Data Analytics Tool and Experience in Scientific Hypothesis Generation in Clinical Research: Protocol for a Mixed Methods Study

Racial Disparity in Clinical Alert Overrides

The biomedical informatics short course at Woods Hole/Georgia: Training to support institutional change

Beyond the override: Using evidence of previous drug tolerance to suppress drug allergy alerts; a retrospective study of opioid alerts

Research informatics and the COVID-19 pandemic: Challenges, innovations, lessons learned, and recommendations

Improving precision medicine using individual patient data from trials

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