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PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments

Bioinformatics (Oxford, England), 2021-07, Vol.37 (13), p.1923-1925

2021

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Microchromosomes Exhibit Distinct Features of Vertebrate Chromosome Structure and Function with Underappreciated Ramifications for Genome Evolution

Molecular biology and evolution, 2021-03, Vol.38 (3), p.904-910

2021

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Probabilistic Species Tree Distances: Implementing the Multispecies Coalescent to Compare Species Trees Within the Same Model-Based Framework Used to Estimate Them

Systematic biology, 2020-01, Vol.69 (1), p.194

2020

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Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America

Ecography (Copenhagen), 2010-04, Vol.33 (2), p.343-354

2010

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The genome of the green anole lizard and a comparative analysis with birds and mammals

Nature (London), 2011-08, Vol.477 (7366), p.587-591

2011

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Origins, genomic structure and copy number variation of snake venom myotoxins

Toxicon (Oxford), 2022-09, Vol.216, p.92-106

2022

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Assessing the Impacts of Positive Selection on Coalescent-Based Species Tree Estimation and Species Delimitation

Systematic biology, 2018-11, Vol.67 (6), p.1076

2018

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Expression of venom gene homologs in diverse python tissues suggests a new model for the evolution of snake venom

Molecular biology and evolution, 2015-01, Vol.32 (1), p.173-183

2015

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Shifts in Selective Pressures on Snake Phototransduction Genes Associated with Photoreceptor Transmutation and Dim-Light Ancestry

Molecular biology and evolution, 2018-06, Vol.35 (6), p.1376-1389

2018

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Evidence that genomic incompatibilities and other multilocus processes impact hybrid fitness in a rattlesnake hybrid zone

Evolution, 2022-11, Vol.76 (11), p.2513-2530

2022

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Discovery and characterization of New Delhi metallo-β-lactamase-1 inhibitor peptides that potentiate meropenem-dependent killing of carbapenemase-producing Enterobacteriaceae

Journal of antimicrobial chemotherapy, 2020-10, Vol.75 (10), p.2843-2851

2020

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ThetaMater: Bayesian estimation of population size parameter θ from genomic data

Bioinformatics, 2018-03, Vol.34 (6), p.1072-1073

2018

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Population Genomic Analyses Confirm Male-Biased Mutation Rates in Snakes

The Journal of heredity, 2021-03, Vol.112 (2), p.221-227

2021

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Viral CpG Deficiency Provides No Evidence That Dogs Were Intermediate Hosts for SARS-CoV-2

Molecular biology and evolution, 2020-09, Vol.37 (9), p.2706-2710

2020

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Genetic surfing, not allopatric divergence, explains spatial sorting of mitochondrial haplotypes in venomous coralsnakes

Evolution, 2016-07, Vol.70 (7), p.1435-1449

2016

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Data Partitions and Complex Models in Bayesian Analysis: The Phylogeny of Gymnophthalmid Lizards

Systematic biology, 2004-06, Vol.53 (3), p.448-469

2004

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GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data

Bioinformatics (Oxford, England), 2017-05, Vol.33 (9), p.1414-1415

2017

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Microsatellite landscape evolutionary dynamics across 450 million years of vertebrate genome evolution

Genome, 2016-05, Vol.59 (5), p.295

2016

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Historical perspectives on population genetics and conservation of three marine turtle species

Conservation genetics, 2005-03, Vol.6 (2), p.235-251

2005

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Phylogenetics, likelihood, evolution and complexity

Bioinformatics, 2012-11, Vol.28 (22), p.2989-2990

2012

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PHYLOGENETIC RELATIONSHIPS OF THE GENUS PROCTOPORUS SENSU STRICTO (SQUAMATA: GYMNOPHTHALMIDAE), WITH A NEW SPECIES FROM PUNO, SOUTHEASTERN PERU

Herpetologica, 2005-09, Vol.61 (3), p.325-336

2005

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GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data

Bioinformatics (Oxford, England), 2016-12

2016

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Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America: Celebrating the diversity of biogeographical research. Special issue: International Biogeography Society, 4th biennial meeting

Ecography (Copenhagen), 2010, Vol.33 (2), p.343-354

2010

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USING MORPHOLOGICAL AND MOLECULAR EVIDENCE TO INFER SPECIES BOUNDARIES WITHIN PROCTOPORUS BOLIVIANUS WERNER (SQUAMATA: GYMNOPHTHALMIDAE)

Herpetologica, 2003-09, Vol.59 (3), p.432-449

2003

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MOLECULAR SYSTEMATICS OF THE MIDDLE AMERICAN JUMPING PITVIPERS (GENUS ATROPOIDES) AND PHYLOGEOGRAPHY OF THE ATROPOIDES NUMMIFER COMPLEX

Herpetologica, 2003-09, Vol.59 (3), p.420-431

2003

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PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments

Microchromosomes Exhibit Distinct Features of Vertebrate Chromosome Structure and Function with Underappreciated Ramifications for Genome Evolution

Probabilistic Species Tree Distances: Implementing the Multispecies Coalescent to Compare Species Trees Within the Same Model-Based Framework Used to Estimate Them

Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America

The genome of the green anole lizard and a comparative analysis with birds and mammals

Origins, genomic structure and copy number variation of snake venom myotoxins

Assessing the Impacts of Positive Selection on Coalescent-Based Species Tree Estimation and Species Delimitation

Expression of venom gene homologs in diverse python tissues suggests a new model for the evolution of snake venom

Shifts in Selective Pressures on Snake Phototransduction Genes Associated with Photoreceptor Transmutation and Dim-Light Ancestry

Evidence that genomic incompatibilities and other multilocus processes impact hybrid fitness in a rattlesnake hybrid zone

Discovery and characterization of New Delhi metallo-β-lactamase-1 inhibitor peptides that potentiate meropenem-dependent killing of carbapenemase-producing Enterobacteriaceae

ThetaMater: Bayesian estimation of population size parameter θ from genomic data

Population Genomic Analyses Confirm Male-Biased Mutation Rates in Snakes

Viral CpG Deficiency Provides No Evidence That Dogs Were Intermediate Hosts for SARS-CoV-2

Genetic surfing, not allopatric divergence, explains spatial sorting of mitochondrial haplotypes in venomous coralsnakes

Data Partitions and Complex Models in Bayesian Analysis: The Phylogeny of Gymnophthalmid Lizards

GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data

Microsatellite landscape evolutionary dynamics across 450 million years of vertebrate genome evolution

Historical perspectives on population genetics and conservation of three marine turtle species

Phylogenetics, likelihood, evolution and complexity

PHYLOGENETIC RELATIONSHIPS OF THE GENUS PROCTOPORUS SENSU STRICTO (SQUAMATA: GYMNOPHTHALMIDAE), WITH A NEW SPECIES FROM PUNO, SOUTHEASTERN PERU

GppFst: genomic posterior predictive simulations of FST and dXY for identifying outlier loci from population genomic data

Using regional comparative phylogeographic data from snake lineages to infer historical processes in Middle America: Celebrating the diversity of biogeographical research. Special issue: International Biogeography Society, 4th biennial meeting

USING MORPHOLOGICAL AND MOLECULAR EVIDENCE TO INFER SPECIES BOUNDARIES WITHIN PROCTOPORUS BOLIVIANUS WERNER (SQUAMATA: GYMNOPHTHALMIDAE)

MOLECULAR SYSTEMATICS OF THE MIDDLE AMERICAN JUMPING PITVIPERS (GENUS ATROPOIDES) AND PHYLOGEOGRAPHY OF THE ATROPOIDES NUMMIFER COMPLEX

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