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CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance

Genome Biology, 2021-07, Vol.22 (1), p.196-196, Article 196

2021

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Genome mining identifies cepacin as a plant-protective metabolite of the biopesticidal bacterium Burkholderia ambifaria

Nature microbiology, 2019-06, Vol.4 (6), p.996-1005

2019

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Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales

Nature communications, 2024-02, Vol.15 (1), p.1371-1371, Article 1371

2024

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Diet-driven mercury contamination is associated with polar bear gut microbiota

Scientific reports, 2021-12, Vol.11 (1), p.23372-11, Article 23372

2021

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The domestication of the probiotic bacterium Lactobacillus acidophilus

Scientific reports, 2014-11, Vol.4 (1), p.7202-7202, Article 7202

2014

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HIGH-FREQUENCY failure of combination antiretroviral therapy in paediatric HIV infection is associated with unmet maternal needs causing maternal NON-ADHERENCE

EClinicalMedicine, 2020-05, Vol.22, p.100344-100344, Article 100344

2020

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Part 1: The Human Gut Microbiome in Health and Disease

Integrative medicine (Encinitas, Calif.), 2014-12, Vol.13 (6), p.17-22

2014

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Discovery and Biosynthesis of Gladiolin: A Burkholderia gladioli Antibiotic with Promising Activity against Mycobacterium tuberculosis

Journal of the American Chemical Society, 2017-06, Vol.139 (23), p.7974-7981

2017

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Minimum taxonomic criteria for bacterial genome sequence depositions and announcements

Journal of microbiological methods, 2012-04, Vol.89 (1), p.18-21

2012

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Global change-driven use of onshore habitat impacts polar bear faecal microbiota

The ISME Journal, 2019-12, Vol.13 (12), p.2916-2926

2019

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Rapid Detection of Emerging Pathogens and Loss of Microbial Diversity Associated with Severe Lung Disease in Cystic Fibrosis

Journal of clinical microbiology, 2015-07, Vol.53 (7), p.2022-2029

2015

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CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community

Microbial genomics, 2016-09, Vol.2 (9), p.e000086-e000086

2016

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Influenza classification from short reads with VAPOR facilitates robust mapping pipelines and zoonotic strain detection for routine surveillance applications

Bioinformatics, 2020-03, Vol.36 (6), p.1681-1688

2020

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Reclassification of the Specialized Metabolite Producer Pseudomonas mesoacidophila ATCC 31433 as a Member of the Burkholderia cepacia Complex

Journal of bacteriology, 2017-07, Vol.199 (13)

2017

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Molecular epidemiology of Pseudomonas aeruginosa in an unsegregated bronchiectasis cohort sharing hospital facilities with a cystic fibrosis cohort

Thorax, 2018-07, Vol.73 (7), p.677-679

2018

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Kill and cure: genomic phylogeny and bioactivity of Burkholderia gladioli bacteria capable of pathogenic and beneficial lifestyles

Microbial genomics, 2021-01, Vol.7 (1)

2021

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The consistent differential expression of genetic pathways following exposure of an industrial Pseudomonas aeruginosa strain to preservatives and a laundry detergent formulation

FEMS microbiology letters, 2018-05, Vol.365 (9)

2018

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Not all Pseudomonas aeruginosa are equal: strains from industrial sources possess uniquely large multireplicon genomes

Microbial genomics, 2019-07, Vol.5 (7)

2019

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Genomic Assemblies of Members of Burkholderia and Related Genera as a Resource for Natural Product Discovery

Microbiology resource announcements, 2020-10, Vol.9 (42)

2020

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Part 2: Treatments for Chronic Gastrointestinal Disease and Gut Dysbiosis

Integrative medicine (Encinitas, Calif.), 2015-02, Vol.14 (1), p.25-33

2015

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Multislice computed tomography in staging lung cancer: the role of multiplanar image reconstruction

Journal of computer assisted tomography, 2005-05, Vol.29 (3), p.357-360

2005

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Peri operative ultrasound guided needle localisation of amputation stump neuroma

Injury, 1999-12, Vol.30 (10), p.689-691

1999

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Molecular genetic characterisation of probiotic bacteria: lactobacillus acidophilus and bifidobacterium species

Bull, Matthew J

2013

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Scalable Pathogen Pipeline Platform (SP^3): Enabling Unified Genomic Data Analysis with Elastic Cloud Computing

2019 IEEE 12th International Conference on Cloud Computing (CLOUD), 2019, p.478-480

2019

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Imaging the hip

British journal of hospital medicine, 1996-02, Vol.55 (4), p.209

Bull, M J

1996

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CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance

Genome mining identifies cepacin as a plant-protective metabolite of the biopesticidal bacterium Burkholderia ambifaria

Genomic epidemiology reveals geographical clustering of multidrug-resistant Escherichia coli ST131 associated with bacteraemia in Wales

Diet-driven mercury contamination is associated with polar bear gut microbiota

The domestication of the probiotic bacterium Lactobacillus acidophilus

HIGH-FREQUENCY failure of combination antiretroviral therapy in paediatric HIV infection is associated with unmet maternal needs causing maternal NON-ADHERENCE

Part 1: The Human Gut Microbiome in Health and Disease

Discovery and Biosynthesis of Gladiolin: A Burkholderia gladioli Antibiotic with Promising Activity against Mycobacterium tuberculosis

Minimum taxonomic criteria for bacterial genome sequence depositions and announcements

Global change-driven use of onshore habitat impacts polar bear faecal microbiota

Rapid Detection of Emerging Pathogens and Loss of Microbial Diversity Associated with Severe Lung Disease in Cystic Fibrosis

CLIMB (the Cloud Infrastructure for Microbial Bioinformatics): an online resource for the medical microbiology community

Influenza classification from short reads with VAPOR facilitates robust mapping pipelines and zoonotic strain detection for routine surveillance applications

Reclassification of the Specialized Metabolite Producer Pseudomonas mesoacidophila ATCC 31433 as a Member of the Burkholderia cepacia Complex

Molecular epidemiology of Pseudomonas aeruginosa in an unsegregated bronchiectasis cohort sharing hospital facilities with a cystic fibrosis cohort

Kill and cure: genomic phylogeny and bioactivity of Burkholderia gladioli bacteria capable of pathogenic and beneficial lifestyles

The consistent differential expression of genetic pathways following exposure of an industrial Pseudomonas aeruginosa strain to preservatives and a laundry detergent formulation

Not all Pseudomonas aeruginosa are equal: strains from industrial sources possess uniquely large multireplicon genomes

Genomic Assemblies of Members of Burkholderia and Related Genera as a Resource for Natural Product Discovery

Part 2: Treatments for Chronic Gastrointestinal Disease and Gut Dysbiosis

Multislice computed tomography in staging lung cancer: the role of multiplanar image reconstruction

Peri operative ultrasound guided needle localisation of amputation stump neuroma

Molecular genetic characterisation of probiotic bacteria: lactobacillus acidophilus and bifidobacterium species

Scalable Pathogen Pipeline Platform (SP^3): Enabling Unified Genomic Data Analysis with Elastic Cloud Computing

Imaging the hip

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