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Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel

Genome Biology, 2020-11, Vol.21 (1), p.275-275, Article 275

2020

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Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)

BMC biology, 2020-10, Vol.18 (1), p.148-148, Article 148

2020

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The odorant receptor repertoire of teleost fish

BMC genomics, 2005-12, Vol.6 (1), p.173-173, Article 173

2005

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The repertoire of olfactory C family G protein-coupled receptors in zebrafish: candidate chemosensory receptors for amino acids

BMC genomics, 2006-12, Vol.7 (1), p.309-309, Article 309

2006

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Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture

mSystems, 2024-03, Vol.9 (3), p.e0092823-e0092823

2024

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The Genome Sequence of the Eastern Woodchuck ( Marmota monax ) - A Preclinical Animal Model for Chronic Hepatitis B

G3 : genes - genomes - genetics, 2019-12, Vol.9 (12), p.3943-3952

2019

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U12DB: a database of orthologous U12-type spliceosomal introns

Nucleic acids research, 2007-01, Vol.35 (Database issue), p.D110-D115

Alioto, Tyler S

2007

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Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome

DNA research, 2023-10, Vol.30 (5)

2023

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Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings

Nature communications, 2020-05, Vol.11 (1), p.2631-11, Article 2631

2020

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Chromosome-level genome assembly of Lilford’s wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain)

DNA research, 2023-06, Vol.30 (3)

2023

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Genome sequence of the olive tree, Olea europaea

Gigascience, 2016-06, Vol.5 (1), p.29-29, Article 29

2016

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A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)

G3 : genes - genomes - genetics, 2023-12, Vol.13 (12)

2023

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Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing

International journal of antimicrobial agents, 2022-01, Vol.59 (1), p.106456-106456, Article 106456

2022

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The High-Quality Genome Sequence of the Oceanic Island Endemic Species Drosophila guanche Reveals Signals of Adaptive Evolution in Genes Related to Flight and Genome Stability

Genome biology and evolution, 2018-08, Vol.10 (8), p.1956-1969

2018

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Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales

Microbial genomics, 2023-11, Vol.9 (11)

2023

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Systematic evaluation of spliced alignment programs for RNA-seq data

Nature methods, 2013-12, Vol.10 (12), p.1185-1191

2013

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Assessment of transcript reconstruction methods for RNA-seq

Nature methods, 2013-12, Vol.10 (12), p.1177-1184

2013

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Genotyping‐by‐sequencing resolves relationships in Polygonaceae tribe Eriogoneae

Taxon, 2021-08, Vol.70 (4), p.826-841

2021

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Atlantic mackerel population structure does not support genetically distinct spawning components

Open research Europe, 2024, Vol.4, p.82

2024

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Whole-Genome Sequencing Recommendations

Field Guidelines for Genetic Experimental Designs in High-Throughput Sequencing, 2016, p.13-41

2016

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A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing

2015

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Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish

Scientific reports, 2021-06, Vol.11 (1), p.13460-13460, Article 13460

2021

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Using geneid to Identify Genes

Current Protocols in Bioinformatics, 2018-12, Vol.64 (1), p.e56-n/a

2018

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Selective single molecule sequencing and assembly of a human Y chromosome of African origin

Nature communications, 2019-01, Vol.10 (1), p.4-8, Article 4

2019

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Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis

Scientific reports, 2022-08, Vol.12 (1), p.14162-14162, Article 14162

2022

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Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel

Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)

The odorant receptor repertoire of teleost fish

The repertoire of olfactory C family G protein-coupled receptors in zebrafish: candidate chemosensory receptors for amino acids

Genomics of the expanding pine pathogen Lecanosticta acicola reveals patterns of ongoing genetic admixture

The Genome Sequence of the Eastern Woodchuck ( Marmota monax ) - A Preclinical Animal Model for Chronic Hepatitis B

U12DB: a database of orthologous U12-type spliceosomal introns

Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome

Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings

Chromosome-level genome assembly of Lilford’s wall lizard, Podarcis lilfordi (Günther, 1874) from the Balearic Islands (Spain)

Genome sequence of the olive tree, Olea europaea

A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)

Emergence of 16S rRNA methyltransferases among carbapenemase-producing Enterobacterales in Spain studied by whole-genome sequencing

The High-Quality Genome Sequence of the Oceanic Island Endemic Species Drosophila guanche Reveals Signals of Adaptive Evolution in Genes Related to Flight and Genome Stability

Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales

Systematic evaluation of spliced alignment programs for RNA-seq data

Assessment of transcript reconstruction methods for RNA-seq

Genotyping‐by‐sequencing resolves relationships in Polygonaceae tribe Eriogoneae

Atlantic mackerel population structure does not support genetically distinct spawning components

Whole-Genome Sequencing Recommendations

A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing

Chromosome anchoring in Senegalese sole (Solea senegalensis) reveals sex-associated markers and genome rearrangements in flatfish

Using geneid to Identify Genes

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

Developmental RNA-Seq transcriptomics of haploid germ cells and spermatozoa uncovers novel pathways associated with teleost spermiogenesis

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