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From FAANG to fork: application of highly annotated genomes to improve farmed animal production

Genome Biology, 2020-11, Vol.21 (1), p.285-285, Article 285

2020

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Bovine NALP5, NALP8, and NALP9 Genes: Assignment to a QTL Region and the Expression in Adult Tissues, Oocytes, and Preimplantation Embryos

Biology of reproduction, 2006-03, Vol.74 (3), p.577-584

2006

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Unmapped reads from cattle RNAseq data: A source for missing and misassembled sequences in the reference assemblies and for detection of pathogens in the host

Genomics (San Diego, Calif.), 2017-01, Vol.109 (1), p.36-42

2017

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Development and evaluation of a milk protein transcript depletion method for differential transcriptome analysis in mammary gland tissue

BMC genomics, 2019-05, Vol.20 (1), p.400-19, Article 400

2019

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The mammalian cervical vertebrae blueprint depends on the T (brachyury) gene

Genetics (Austin), 2015-03, Vol.199 (3), p.873-883

2015

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A novel RNAseq-assisted method for MHC class I genotyping in a non-model species applied to a lethal vaccination-induced alloimmune disease

BMC genomics, 2016-05, Vol.17 (1), p.365-365, Article 365

2016

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Monitoring the immune response to vaccination with an inactivated vaccine associated to bovine neonatal pancytopenia by deep sequencing transcriptome analysis in cattle

Veterinary research (Paris), 2013-10, Vol.44 (1), p.93-93, Article 93

2013

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Genomic prediction of unordered categorical traits: an application to subpopulation assignment in German Warmblood horses

Genetics selection evolution (Paris), 2016-02, Vol.48 (13), p.13-13, Article 13

2016

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Detection of genetic variants affecting cattle behaviour and their impact on milk production: a genome‐wide association study

Animal genetics, 2016-02, Vol.47 (1), p.12-18

2016

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Correction: Sequence-based GWAS meta-analyses for beef production traits

Genetics selection evolution (Paris), 2023-11, Vol.55 (1), p.1-1

2023

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Differentially Expressed miRNA-Gene Targets Related to Intramuscular Fat in Musculus Longissimus Dorsi of Charolais × Holstein F 2 -Crossbred Bulls

Genes, 2020-06, Vol.11 (6)

2020

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Amelogenin cross-amplification in the family Bovidae and its application for sex determination

Molecular reproduction and development, 2006-10, Vol.73 (10), p.1333-1337

2006

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A selective block of nuclear actin export stabilizes the giant nuclei of Xenopus oocytes

Nature cell biology, 2006-03, Vol.8 (3), p.257-263

2006

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The bovine PPARGC1A gene: molecular characterization and association of an SNP with variation of milk fat synthesis

Physiological genomics, 2005-03, Vol.21 (1), p.1-13

2005

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Combined analysis of data from two granddaughter designs: A simple strategy for QTL confirmation and increasing experimental power in dairy cattle

Genetics selection evolution (Paris), 2003-05, Vol.35 (3), p.319-338, Article 319

2003

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Improving the annotation of the cattle genome by annotating transcription start sites in a diverse set of tissues and populations using Cap Analysis Gene Expression sequencing

G3 : genes - genomes - genetics, 2023-08, Vol.13 (8)

2023

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Correction: Sequence-based GWAS meta-analyses for beef production traits

Genetics selection evolution (Paris), 2023-11, Vol.55 (1), p.79-79, Article 79

2023

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Gene expression profile of Musculus longissimus dorsi in bulls of a Charolais × Holstein F 2 -cross with divergent intramuscular fat content

Genomics data, 2016-03, Vol.7, p.131-133

2016

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Multiple quantitative trait loci mapping with cofactors and application of alternative variants of the false discovery rate in an enlarged granddaughter design

Genetics (Austin), 2004-10, Vol.168 (2), p.1019-1027

2004

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Metabolomic profiles indicate distinct physiological pathways affected by two loci with major divergent effect on Bos taurus growth and lipid deposition

Physiological genomics, 2010-10, Vol.42A (2), p.79-88

2010

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Plasma ghrelin is positively associated with body fat, liver fat and milk fat content but not with feed intake of dairy cows after parturition

Journal of endocrinology, 2013-02, Vol.216 (2), p.217-229

2013

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Sex determination in cattle based on simultaneous amplification of a new male-specific DNA sequence and an autosomal locus using the same primers

Molecular reproduction and development, 2001-09, Vol.60 (1), p.13-19

2001

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Alleles of the bovine DGAT1 variable number of tandem repeat associated with a milk fat QTL at chromosome 14 can stimulate gene expression

Physiological genomics, 2006-03, Vol.25 (1), p.116-120

2006

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Short communication: Evaluation of bovine milk residues from routine milk testing programs as DNA source for genotyping

Journal of dairy science, 2012-09, Vol.95 (9), p.5436-5441

2012

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From FAANG to fork: application of highly annotated genomes to improve farmed animal production

Bovine NALP5, NALP8, and NALP9 Genes: Assignment to a QTL Region and the Expression in Adult Tissues, Oocytes, and Preimplantation Embryos

Unmapped reads from cattle RNAseq data: A source for missing and misassembled sequences in the reference assemblies and for detection of pathogens in the host

Development and evaluation of a milk protein transcript depletion method for differential transcriptome analysis in mammary gland tissue

The mammalian cervical vertebrae blueprint depends on the T (brachyury) gene

A novel RNAseq-assisted method for MHC class I genotyping in a non-model species applied to a lethal vaccination-induced alloimmune disease

Monitoring the immune response to vaccination with an inactivated vaccine associated to bovine neonatal pancytopenia by deep sequencing transcriptome analysis in cattle

Genomic prediction of unordered categorical traits: an application to subpopulation assignment in German Warmblood horses

Detection of genetic variants affecting cattle behaviour and their impact on milk production: a genome‐wide association study

Correction: Sequence-based GWAS meta-analyses for beef production traits

Differentially Expressed miRNA-Gene Targets Related to Intramuscular Fat in Musculus Longissimus Dorsi of Charolais × Holstein F 2 -Crossbred Bulls

Amelogenin cross-amplification in the family Bovidae and its application for sex determination

A selective block of nuclear actin export stabilizes the giant nuclei of Xenopus oocytes

The bovine PPARGC1A gene: molecular characterization and association of an SNP with variation of milk fat synthesis

Consensus Statement: Chromosomal Microarray Is a First-Tier Clinical Diagnostic Test for Individuals with Developmental Disabilities or Congenital Anomalies

Combined analysis of data from two granddaughter designs: A simple strategy for QTL confirmation and increasing experimental power in dairy cattle

Improving the annotation of the cattle genome by annotating transcription start sites in a diverse set of tissues and populations using Cap Analysis Gene Expression sequencing

Correction: Sequence-based GWAS meta-analyses for beef production traits

Gene expression profile of Musculus longissimus dorsi in bulls of a Charolais × Holstein F 2 -cross with divergent intramuscular fat content

Multiple quantitative trait loci mapping with cofactors and application of alternative variants of the false discovery rate in an enlarged granddaughter design

Metabolomic profiles indicate distinct physiological pathways affected by two loci with major divergent effect on Bos taurus growth and lipid deposition

Plasma ghrelin is positively associated with body fat, liver fat and milk fat content but not with feed intake of dairy cows after parturition

Sex determination in cattle based on simultaneous amplification of a new male-specific DNA sequence and an autosomal locus using the same primers

Alleles of the bovine DGAT1 variable number of tandem repeat associated with a milk fat QTL at chromosome 14 can stimulate gene expression

Short communication: Evaluation of bovine milk residues from routine milk testing programs as DNA source for genotyping

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