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Kernel Machine SNP-Set Testing Under Multiple Candidate Kernels

Genetic epidemiology, 2013-04, Vol.37 (3), p.267-275

2013

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Unexpected genomic relationships between Bacillus anthracis strains from Bangladesh and Central Europe

Infection, genetics and evolution, 2016-11, Vol.45, p.66-74

2016

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Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift

Frontiers in genetics, 2012, Vol.3, p.35

2012

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Global adaptive rank truncated product method for gene-set analysis in association studies

Biometrical journal, 2014-09, Vol.56 (5), p.901-911

2014

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A Y‐chromosomal comparison of the Madjars (Kazakhstan) and the Magyars (Hungary)

American journal of physical anthropology, 2009-07, Vol.139 (3), p.305-310

2009

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Interpreting Joint SNP Analysis Results: When Are Two Distinct Signals Really Two Distinct Signals?

Genetic epidemiology, 2013-04, Vol.37 (3), p.301-309

2013

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BA3‐SNPs: Contemporary migration reconfigured in BayesAss for next‐generation sequence data

Methods in ecology and evolution, 2019-10, Vol.10 (10), p.1808-1813

2019

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Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

Frontiers in microbiology, 2021-11, Vol.12, p.738284-738284

2021

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Characterizing the Genetic Diversity of Salmonella Isolated from U.S. Raw Inshell Pistachios Using Whole Genome Sequencing

Journal of food protection, 2023-10, Vol.86 (10), p.100143-100143, Article 100143

2023

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Genetic Profile of Brucella melitensis Strains Isolated on the Territory of the Russian Federation, Based on Analysis of Single Nucleotide Polymorphisms Following Whole Genome Sequencing

Problemy osobo opasnyh infekcij, 2024-04 (1), p.154-161

2024

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AdmixPipe: population analyses in Admixture for non-model organisms

BMC bioinformatics, 2020-07, Vol.21 (1), p.1-337, Article 337

2020

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Stepwise approach to SNP-set analysis illustrated with the Metabochip and colorectal cancer in Japanese Americans of the Multiethnic Cohort

BMC genomics, 2018-07, Vol.19 (1), p.524-524, Article 524

2018

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Testing the Ion AmpliSeq™ HID Y-SNP Research Panel v1 for performance and resolution in admixed South Americans of haplogroup Q

Forensic science international : genetics, 2022-07, Vol.59, p.102708-102708, Article 102708

2022

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Linkage disequilibrium and haplotype analysis of

Future oncology (London, England), 2020-04, Vol.16 (12), p.779-792

2020

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BAYESIAN LARGE-SCALE MULTIPLE REGRESSION WITH SUMMARY STATISTICS FROM GENOME-WIDE ASSOCIATION STUDIES

The annals of applied statistics, 2017-09, Vol.11 (3), p.1561-1592

2017

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Comparative whole-genome analysis of diphtheria toxin-producing Corynebacterium ulcerans isolates from sheltered cats in Osaka, Japan

Journal of Veterinary Medical Science, 2023, pp.22-0576

2023

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Research Review: Polygenic methods and their application to psychiatric traits

Journal of child psychology and psychiatry, 2014-10, Vol.55 (10), p.1068-1087

2014

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Daptomycin Resistant Staphylococcus aureus Clinical Strain With Novel Non-synonymous Mutations in the mprF and vraS Genes: A New Insight Into Daptomycin Resistance

Frontiers in microbiology, 2018-11, Vol.9, p.2705-2705

2018

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Linkage Disequilibrium Statistics and Block Visualization

Methods in molecular biology (Clifton, N.J.), 2022, Vol.2443, p.483

Marsh, Jacob

2022

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Next-Generation Sequencing: ForenSeq™ DNA Signature Prep Kit with the Illumina MiSeq FGx

Methods in molecular biology (Clifton, N.J.), 2023, Vol.2685, p.397

Foley, Megan M

2023

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Molecular typing and genome sequencing allow the identification of persistent Listeria monocytogenes strains and the tracking of the contamination source in food environments

International journal of food microbiology, 2023-02, Vol.386, p.110025-110025, Article 110025

2023

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Integrative molecular characterization and in silico analyses of caprine MC3R, MC4R, and MC5R genes

Small ruminant research, 2022-11, Vol.216, p.106812, Article 106812

2022

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Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of Brucella melitensis Infections

Journal of clinical microbiology, 2018-09, Vol.56 (9)

2018

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Standard methods for characterising subspecies and ecotypes of Apis mellifera

Journal of apicultural research, 2013-01, Vol.52 (4), p.1-28

2013

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Whole-Genome Single-Nucleotide Polymorphism (SNP) Analysis Applied Directly to Stool for Genotyping Shiga Toxin-Producing Escherichia coli: an Advanced Molecular Detection Method for Foodborne Disease Surveillance and Outbreak Tracking

Journal of clinical microbiology, 2019-07, Vol.57 (7)

2019

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Kernel Machine SNP-Set Testing Under Multiple Candidate Kernels

Unexpected genomic relationships between Bacillus anthracis strains from Bangladesh and Central Europe

Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift

Global adaptive rank truncated product method for gene-set analysis in association studies

A Y‐chromosomal comparison of the Madjars (Kazakhstan) and the Magyars (Hungary)

Interpreting Joint SNP Analysis Results: When Are Two Distinct Signals Really Two Distinct Signals?

BA3‐SNPs: Contemporary migration reconfigured in BayesAss for next‐generation sequence data

Towards Real-Time and Affordable Strain-Level Metagenomics-Based Foodborne Outbreak Investigations Using Oxford Nanopore Sequencing Technologies

Characterizing the Genetic Diversity of Salmonella Isolated from U.S. Raw Inshell Pistachios Using Whole Genome Sequencing

Genetic Profile of Brucella melitensis Strains Isolated on the Territory of the Russian Federation, Based on Analysis of Single Nucleotide Polymorphisms Following Whole Genome Sequencing

AdmixPipe: population analyses in Admixture for non-model organisms

Stepwise approach to SNP-set analysis illustrated with the Metabochip and colorectal cancer in Japanese Americans of the Multiethnic Cohort

Testing the Ion AmpliSeq™ HID Y-SNP Research Panel v1 for performance and resolution in admixed South Americans of haplogroup Q

Linkage disequilibrium and haplotype analysis of

BAYESIAN LARGE-SCALE MULTIPLE REGRESSION WITH SUMMARY STATISTICS FROM GENOME-WIDE ASSOCIATION STUDIES

Comparative whole-genome analysis of diphtheria toxin-producing Corynebacterium ulcerans isolates from sheltered cats in Osaka, Japan

Research Review: Polygenic methods and their application to psychiatric traits

Daptomycin Resistant Staphylococcus aureus Clinical Strain With Novel Non-synonymous Mutations in the mprF and vraS Genes: A New Insight Into Daptomycin Resistance

Linkage Disequilibrium Statistics and Block Visualization

Next-Generation Sequencing: ForenSeq™ DNA Signature Prep Kit with the Illumina MiSeq FGx

Molecular typing and genome sequencing allow the identification of persistent Listeria monocytogenes strains and the tracking of the contamination source in food environments

Integrative molecular characterization and in silico analyses of caprine MC3R, MC4R, and MC5R genes

Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analysis in the Epidemiology of Brucella melitensis Infections

Standard methods for characterising subspecies and ecotypes of Apis mellifera

Whole-Genome Single-Nucleotide Polymorphism (SNP) Analysis Applied Directly to Stool for Genotyping Shiga Toxin-Producing Escherichia coli: an Advanced Molecular Detection Method for Foodborne Disease Surveillance and Outbreak Tracking

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