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N 6 -methyladenosine enhances post-transcriptional gene regulation by microRNAs

Bioinformatics advances, 2022, Vol.2 (1), p.vbab046-vbab046

2022

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Potential covalent drugs targeting the main protease of the SARS-CoV-2 coronavirus

Bioinformatics, 2020-06, Vol.36 (11), p.3295-3298

2020

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Circular RNAs are depleted of polymorphisms at microRNA binding sites

Bioinformatics (Oxford, England), 2014-08, Vol.30 (16), p.2243-2246

2014

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RNA-seq differential expression studies: more sequence or more replication?

Bioinformatics, 2014-02, Vol.30 (3), p.301-304

2014

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Folding the unfoldable: using AlphaFold to explore spurious proteins

Bioinformatics advances, 2022, Vol.2 (1), p.vbab043-vbab043

2022

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Computationally predicted gene regulatory networks in molluscan biomineralization identify extracellular matrix production and ion transportation pathways

Bioinformatics, 2020-03, Vol.36 (5), p.1326-1332

2020

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Optimizer's dilemma: optimization strongly influences model selection in transcriptomic prediction

Bioinformatics advances, 2024, Vol.4 (1), p.vbae004

2024

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Feature selection using a one dimensional naïve Bayes' classifier increases the accuracy of support vector machine classification of CDR3 repertoires

Bioinformatics (Oxford, England), 2017-04, Vol.33 (7), p.951-955

2017

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Improved mutant function prediction via PACT: Protein Analysis and Classifier Toolkit

Bioinformatics (Oxford, England), 2019-08, Vol.35 (16), p.2707-2712

2019

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Mechanistic insights into SARS-CoV-2 epidemic via revealing the features of SARS-CoV-2 coding proteins and host responses upon its infection

Bioinformatics, 2021-01, Vol.36 (21), p.5133-5138

2021

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Biogenesis mechanisms of circular RNA can be categorized through feature extraction of a machine learning model

Bioinformatics, 2019-12, Vol.35 (23), p.4867-4870

2019

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TMEM132: an ancient architecture of cohesin and immunoglobulin domains define a new family of neural adhesion molecules

Bioinformatics, 2018-03, Vol.34 (5), p.721-724

2018

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Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors

Bioinformatics, 2019-03, Vol.35 (5), p.723-728

2019

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Detecting Gene Ontology misannotations using taxon-specific rate ratio comparisons

Bioinformatics, 2020-08, Vol.36 (16), p.4383-4388

2020

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OAF: a new member of the BRICHOS family

Bioinformatics advances, 2022, Vol.2 (1), p.vbac087-vbac087

2022

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Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability

Bioinformatics, 2018-04, Vol.34 (7), p.1081-1085

2018

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Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria

Bioinformatics, 2010-08, Vol.26 (16), p.1927-1931

2010

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Obelisc: an identical-by-descent mapping tool based on SNP streak

Bioinformatics, 2021-04, Vol.36 (24), p.5567-5570

2021

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PERCC1 , a new member of the Yap/TAZ / FAM181 transcriptional co-regulator family

Bioinformatics advances, 2022-01, Vol.2 (1), p.vbac008-vbac008

2022

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Vasohibins: new transglutaminase-like cysteine proteases possessing a non-canonical Cys-His-Ser catalytic triad

Bioinformatics, 2016-05, Vol.32 (10), p.1441-1445

2016

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YY1 is a cis-regulator in the organoid models of high mammographic density

Bioinformatics, 2020-03, Vol.36 (6), p.1663-1667

2020

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Exosomes secreted by human cells transport largely mRNA fragments that are enriched in the 3'-untranslated regions

Biology direct, 2013-06, Vol.8 (1), p.12-12, Article 12

2013

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Alpha-CENTAURI: assessing novel centromeric repeat sequence variation with long read sequencing

Bioinformatics, 2016-07, Vol.32 (13), p.1921-1924

2016

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TiSAn: estimating tissue-specific effects of coding and non-coding variants

Bioinformatics, 2018-09, Vol.34 (18), p.3061-3068

2018

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Bacterial GRAS domain proteins throw new light on gibberellic acid response mechanisms

Bioinformatics (Oxford, England), 2012-10, Vol.28 (19), p.2407-2411

2012

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N 6 -methyladenosine enhances post-transcriptional gene regulation by microRNAs

Potential covalent drugs targeting the main protease of the SARS-CoV-2 coronavirus

Circular RNAs are depleted of polymorphisms at microRNA binding sites

RNA-seq differential expression studies: more sequence or more replication?

Folding the unfoldable: using AlphaFold to explore spurious proteins

Computationally predicted gene regulatory networks in molluscan biomineralization identify extracellular matrix production and ion transportation pathways

Optimizer's dilemma: optimization strongly influences model selection in transcriptomic prediction

Feature selection using a one dimensional naïve Bayes' classifier increases the accuracy of support vector machine classification of CDR3 repertoires

Improved mutant function prediction via PACT: Protein Analysis and Classifier Toolkit

Mechanistic insights into SARS-CoV-2 epidemic via revealing the features of SARS-CoV-2 coding proteins and host responses upon its infection

Biogenesis mechanisms of circular RNA can be categorized through feature extraction of a machine learning model

TMEM132: an ancient architecture of cohesin and immunoglobulin domains define a new family of neural adhesion molecules

Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors

Detecting Gene Ontology misannotations using taxon-specific rate ratio comparisons

OAF: a new member of the BRICHOS family

Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability

Homology of SMP domains to the TULIP superfamily of lipid-binding proteins provides a structural basis for lipid exchange between ER and mitochondria

Obelisc: an identical-by-descent mapping tool based on SNP streak

PERCC1 , a new member of the Yap/TAZ / FAM181 transcriptional co-regulator family

Vasohibins: new transglutaminase-like cysteine proteases possessing a non-canonical Cys-His-Ser catalytic triad

YY1 is a cis-regulator in the organoid models of high mammographic density

Exosomes secreted by human cells transport largely mRNA fragments that are enriched in the 3'-untranslated regions

Alpha-CENTAURI: assessing novel centromeric repeat sequence variation with long read sequencing

TiSAn: estimating tissue-specific effects of coding and non-coding variants

Bacterial GRAS domain proteins throw new light on gibberellic acid response mechanisms

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