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FBA Ecological Guild: Trio of Firmicutes-Bacteroidetes Alliance against Actinobacteria in Human Oral Microbiome

Scientific reports, 2020-01, Vol.10 (1), p.287-287, Article 287

2020

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Influences of Helicobacter pylori infection on diversity, heterogeneity, and composition of human gastric microbiomes across stages of gastric cancer development

Helicobacter (Cambridge, Mass.), 2022-08, Vol.27 (4), p.e12899-n/a

2022

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DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies

Scientific reports, 2016-08, Vol.6 (1), p.31900-31900, Article 31900

2016

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Towards a unified medical microbiome ecology of the OMU for metagenomes and the OTU for microbes

BMC bioinformatics, 2024-03, Vol.25 (1), p.137-137, Article 137

Ma, Zhanshan Sam

2024

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A theoretic approach to the mode of gut microbiome translocation in SIV-infected Asian macaques

FEMS microbiology ecology, 2020-08, Vol.96 (8), p.1

2020

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A unified survival-analysis approach to insect population development and survival times

Scientific reports, 2021-04, Vol.11 (1), p.8223-8223, Article 8223

Ma, Zhanshan Sam

2021

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How and Why Men and Women Differ in Their Microbiomes: Medical Ecology and Network Analyses of the Microgenderome

Advanced science, 2019-12, Vol.6 (23), p.1902054-n/a

2019

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The Upper Respiratory Tract Microbiome Network Impacted by SARS-CoV-2

Microbial ecology, 2023-08, Vol.86 (2), p.1428-1437

2023

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Heterogeneity–disease relationship in the human microbiome-associated diseases

FEMS microbiology ecology, 2020-07, Vol.96 (7), p.1

Ma, Zhanshan (Sam)

2020

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Testing the Neutral Theory of Biodiversity with Human Microbiome Datasets

Scientific reports, 2016-08, Vol.6 (1), p.31448-31448, Article 31448

2016

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Microbiome–host-phylogeny relationships in animal gastrointestinal tract microbiomes

FEMS microbiology ecology, 2022-03, Vol.98 (2)

2022

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Power law analysis of the human microbiome

Molecular ecology, 2015-11, Vol.24 (21), p.5428-5445

Ma, Zhanshan (Sam)

2015

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Virome comparison (VC): A novel approach to comparing viromes based on virus species specificity and virome specificity diversity

Journal of medical virology, 2023-04, Vol.95 (4), p.e28682-n/a

Ma, Zhanshan (Sam)

2023

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Diversity-disease relationships and shared species analyses for human microbiome-associated diseases

The ISME Journal, 2019-08, Vol.13 (8), p.1911-1919

2019

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Soil bacterial communities of different natural forest types in Northeast China

Plant and soil, 2014-10, Vol.383 (1-2), p.203-216

2014

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A new DTAR (diversity–time–area relationship) model demonstrated with the indoor microbiome

Journal of biogeography, 2019-09, Vol.46 (9), p.2024-2041

Ma, Zhanshan (Sam)

2019

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Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota

The ISME Journal, 2014-04, Vol.8 (4), p.881-893

2014

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The P/N (Positive-to-Negative Links) Ratio in Complex Networks—A Promising In Silico Biomarker for Detecting Changes Occurring in the Human Microbiome

Microbial ecology, 2018-05, Vol.75 (4), p.1063-1074

Ma, Zhanshan (Sam)

2018

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Testing the Anna Karenina Principle in Human Microbiome-Associated Diseases

iScience, 2020-04, Vol.23 (4), p.101007-101007, Article 101007

Ma, Zhanshan (Sam)

2020

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Sketching the Human Microbiome Biogeography with DAR (Diversity-Area Relationship) Profiles

Microbial ecology, 2019-04, Vol.77 (3), p.821-838

Ma, Zhanshan (Sam)

2019

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Microbiome Transmission During Sexual Intercourse Appears Stochastic and Supports the Red Queen Hypothesis

Frontiers in microbiology, 2022-03, Vol.12, p.789983-789983

Ma, Zhanshan Sam

2022

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Measuring metagenome diversity and similarity with Hill numbers

Molecular ecology resources, 2018-11, Vol.18 (6), p.1339-1355

2018

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Global Microbiome Diversity Scaling in Hot Springs With DAR (Diversity-Area Relationship) Profiles

Frontiers in microbiology, 2019-02, Vol.10, p.118-118

2019

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Temporal dynamics of the human vaginal microbiota

Science translational medicine, 2012-05, Vol.4 (132), p.132ra52

2012

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Shared Species Analysis, Augmented by Stochasticity Analysis, Is More Effective Than Diversity Analysis in Detecting Variations in the Gut Microbiomes

Frontiers in microbiology, 2022-07, Vol.13, p.914429-914429

Ma, Zhanshan (Sam)

2022

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FBA Ecological Guild: Trio of Firmicutes-Bacteroidetes Alliance against Actinobacteria in Human Oral Microbiome

Influences of Helicobacter pylori infection on diversity, heterogeneity, and composition of human gastric microbiomes across stages of gastric cancer development

DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies

Towards a unified medical microbiome ecology of the OMU for metagenomes and the OTU for microbes

A theoretic approach to the mode of gut microbiome translocation in SIV-infected Asian macaques

A unified survival-analysis approach to insect population development and survival times

How and Why Men and Women Differ in Their Microbiomes: Medical Ecology and Network Analyses of the Microgenderome

The Upper Respiratory Tract Microbiome Network Impacted by SARS-CoV-2

Heterogeneity–disease relationship in the human microbiome-associated diseases

Testing the Neutral Theory of Biodiversity with Human Microbiome Datasets

Microbiome–host-phylogeny relationships in animal gastrointestinal tract microbiomes

Power law analysis of the human microbiome

Virome comparison (VC): A novel approach to comparing viromes based on virus species specificity and virome specificity diversity

Diversity-disease relationships and shared species analyses for human microbiome-associated diseases

Soil bacterial communities of different natural forest types in Northeast China

A new DTAR (diversity–time–area relationship) model demonstrated with the indoor microbiome

Spatial heterogeneity and co-occurrence patterns of human mucosal-associated intestinal microbiota

The P/N (Positive-to-Negative Links) Ratio in Complex Networks—A Promising In Silico Biomarker for Detecting Changes Occurring in the Human Microbiome

Testing the Anna Karenina Principle in Human Microbiome-Associated Diseases

Sketching the Human Microbiome Biogeography with DAR (Diversity-Area Relationship) Profiles

Microbiome Transmission During Sexual Intercourse Appears Stochastic and Supports the Red Queen Hypothesis

Measuring metagenome diversity and similarity with Hill numbers

Global Microbiome Diversity Scaling in Hot Springs With DAR (Diversity-Area Relationship) Profiles

Temporal dynamics of the human vaginal microbiota

Shared Species Analysis, Augmented by Stochasticity Analysis, Is More Effective Than Diversity Analysis in Detecting Variations in the Gut Microbiomes

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