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ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

Nature communications, 2015-10, Vol.6 (1), p.8733-8733, Article 8733

2015

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TFBSshape: an expanded motif database for DNA shape features of transcription factor binding sites

Nucleic acids research, 2020-01, Vol.48 (D1), p.D246

2020

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GWASTool: A web pipeline for detecting SNP-phenotype associations

Fundamental research (Beijing), 2024-07, Vol.4 (4), p.761-769

2024

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Correspondence: Reply to 'DNA shape is insufficient to explain binding'

Nature communications, 2017-06, Vol.8 (1), p.15644-15644, Article 15644

2017

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Correction: Corrigendum: ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

Nature communications, 2017-06, Vol.8 (1), p.1-1, Article 15723

2017

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Circulating tumor DNA mutation profile is associated with the prognosis and treatment response of Chinese patients with newly diagnosed diffuse large B-cell lymphoma

Frontiers in oncology, 2022-11, Vol.12, p.1003957-1003957

2022

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The latest edition of WHO and ELN guidance and a new risk model for Chinese acute myeloid leukemia patients

Frontiers in medicine, 2023-06, Vol.10, p.1165445-1165445

2023

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A complete telomere-to-telomere assembly of the maize genome

Nature genetics, 2023-07, Vol.55 (7), p.1221-1231

2023

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Dynamic transcriptome landscape of maize pericarp development

The Plant journal : for cell and molecular biology, 2024-03, Vol.117 (5), p.1574-1591

2024

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Hypoxia regulates ABCG2 activity through the activivation of ERK1/2/HIF-1α and contributes to chemoresistance in pancreatic cancer cells

Cancer biology & therapy, 2016-02, Vol.17 (2), p.188-198

2016

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NGS-based IgH gene rearrangement monitoring predicts relapse and guides maintenance therapy in DLBCL: A case report from indolent lymphoma to aggressive lymphoma

Pathology, research and practice, 2023-08, Vol.248, p.154644, Article 154644

2023

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Tissue-Matched IgH Gene Rearrangement of Circulating Tumor DNA Shows Significant Value in Predicting the Progression of Diffuse Large B Cell Lymphoma

The oncologist (Dayton, Ohio), 2024-05, Vol.29 (5), p.e672-e680

2024

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Artemin regulates CXCR4 expression to induce migration and invasion in pancreatic cancer cells through activation of NF-κB signaling

Experimental cell research, 2018-04, Vol.365 (1), p.12-23

2018

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Detection of the DNA methylation of seven genes contribute to the early diagnosis of lung cancer

Journal of cancer research and clinical oncology, 2024-02, Vol.150 (2), p.77-77, Article 77

2024

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Detection of MET amplification by droplet digital PCR in peripheral blood samples of non-small cell lung cancer

Journal of cancer research and clinical oncology, 2023-05, Vol.149 (5), p.1667-1677

2023

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Fractalkine/CX3CR1 induces apoptosis resistance and proliferation through the activation of the AKT/NF‐κB cascade in pancreatic cancer cells

Cell biochemistry and function, 2017-08, Vol.35 (6), p.315-326

2017

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Nerve Growth Factor Regulates CD133 Function to Promote Tumor Cell Migration and Invasion via activating ERK1/2 signaling in Pancreatic Cancer

Pancreatology : official journal of the International Association of Pancreatology (IAP) ... [et al.], 2016-11, Vol.16 (6), p.1005-1014

2016

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Tenascin-C induces migration and invasion through JNK/c-Jun signalling in pancreatic cancer

Oncotarget, 2017-09, Vol.8 (43), p.74406-74422

2017

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Epigenetic stress responses induce muscle stem-cell ageing by Hoxa9 developmental signals

Nature (London), 2016-12, Vol.540 (7633), p.428-432

2016

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Gastrin regulates ABCG2 to promote the migration, invasion and side populations in pancreatic cancer cells via activation of NF-κB signaling

Experimental cell research, 2016-08, Vol.346 (1), p.74-84

2016

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Genomic variation in weedy and cultivated broomcorn millet accessions uncovers the genetic architecture of agronomic traits

Nature genetics, 2024-05, Vol.56 (5), p.1006-1017

2024

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DNA Shape Features Improve Transcription Factor Binding Site Predictions In Vivo

Cell systems, 2016-09, Vol.3 (3), p.278-286.e4

2016

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Targeted large fragment deletion in plants using paired crRNAs with type I CRISPR system

Plant biotechnology journal, 2023-11, Vol.21 (11), p.2196-2208

2023

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Corrigendum: ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

Nature communications, 2017-06, Vol.8, p.15723-15723

2017

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GNIFdb: a neoantigen intrinsic feature database for glioma

Database : the journal of biological databases and curation, 2022-02, Vol.2022

2022

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ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

TFBSshape: an expanded motif database for DNA shape features of transcription factor binding sites

GWASTool: A web pipeline for detecting SNP-phenotype associations

Correspondence: Reply to 'DNA shape is insufficient to explain binding'

Correction: Corrigendum: ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

Circulating tumor DNA mutation profile is associated with the prognosis and treatment response of Chinese patients with newly diagnosed diffuse large B-cell lymphoma

The latest edition of WHO and ELN guidance and a new risk model for Chinese acute myeloid leukemia patients

A complete telomere-to-telomere assembly of the maize genome

Dynamic transcriptome landscape of maize pericarp development

Hypoxia regulates ABCG2 activity through the activivation of ERK1/2/HIF-1α and contributes to chemoresistance in pancreatic cancer cells

NGS-based IgH gene rearrangement monitoring predicts relapse and guides maintenance therapy in DLBCL: A case report from indolent lymphoma to aggressive lymphoma

Tissue-Matched IgH Gene Rearrangement of Circulating Tumor DNA Shows Significant Value in Predicting the Progression of Diffuse Large B Cell Lymphoma

Artemin regulates CXCR4 expression to induce migration and invasion in pancreatic cancer cells through activation of NF-κB signaling

Detection of the DNA methylation of seven genes contribute to the early diagnosis of lung cancer

Detection of MET amplification by droplet digital PCR in peripheral blood samples of non-small cell lung cancer

Fractalkine/CX3CR1 induces apoptosis resistance and proliferation through the activation of the AKT/NF‐κB cascade in pancreatic cancer cells

Nerve Growth Factor Regulates CD133 Function to Promote Tumor Cell Migration and Invasion via activating ERK1/2 signaling in Pancreatic Cancer

Tenascin-C induces migration and invasion through JNK/c-Jun signalling in pancreatic cancer

Epigenetic stress responses induce muscle stem-cell ageing by Hoxa9 developmental signals

Gastrin regulates ABCG2 to promote the migration, invasion and side populations in pancreatic cancer cells via activation of NF-κB signaling

Genomic variation in weedy and cultivated broomcorn millet accessions uncovers the genetic architecture of agronomic traits

DNA Shape Features Improve Transcription Factor Binding Site Predictions In Vivo

Targeted large fragment deletion in plants using paired crRNAs with type I CRISPR system

Corrigendum: ChEC-seq kinetics discriminates transcription factor binding sites by DNA sequence and shape in vivo

GNIFdb: a neoantigen intrinsic feature database for glioma

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