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Informatics and machine learning: from Martingales to metaheuristics

Stephen Winters-Hilt

1, 2022

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Implementing EM and Viterbi algorithms for Hidden Markov Model in linear memory

BMC bioinformatics, 2008-04, Vol.9 (1), p.224-224, Article 224

2008

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Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel

Nature biotechnology, 2001-03, Vol.19 (3), p.248-252

2001

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Nanopore Detector based analysis of single-molecule conformational kinetics and binding interactions

BMC bioinformatics, 2006-09, Vol.7 Suppl 2 (S2), p.S21-S21, Article S21

Winters-Hilt, Stephen

2006

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The NTD Nanoscope: potential applications and implementations

BMC bioinformatics, 2011-10, Vol.12 Suppl 10 (S10), p.S21-S21, Article S21

2011

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Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S12-S12, Article S12

2007

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A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S19-S19, Article S19

2007

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Support vector machine implementations for classification & clustering

BMC bioinformatics, 2006-09, Vol.7 Suppl 2 (S2), p.S4-S4, Article S4

2006

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Discrimination among individual Watson-Crick base pairs at the termini of single DNA hairpin molecules

Nucleic acids research, 2003-02, Vol.31 (4), p.1311-1318

2003

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Alt-Splice Gene Predictor Using Multitrack-Clique Analysis: Verification of Statistical Support for Modelling in Genomes of Multicellular Eukaryotes

Informatics (Basel), 2017-03, Vol.4 (1), p.3

2017

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Duration learning for analysis of nanopore ionic current blockades

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S14-S14, Article S14

2007

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A Metastate HMM with Application to Gene Structure Identification in Eukaryotes

EURASIP journal on advances in signal processing, 2010-01, Vol.2010 (1), Article 581373

2010

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A Metastate HMM with Application to Gene Structure Identification in Eukaryotes

EURASIP journal on advances in signal processing, 2010-01, Vol.2010 (1), p.581373-581373

2010

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Preliminary nanopore cheminformatics analysis of aptamer-target binding strength

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S11-S11, Article S11

2007

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Informatics and Machine Learning

Stephen Winters-Hilt

2022

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Nanopore-based kinetics analysis of individual antibody-channel and antibody-antigen interactions

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S20-S20, Article S20

2007

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Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

BMC bioinformatics, 2011-10, Vol.12 (S10), p.S1-S1, Article S1

2011

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Accumulation of GC donor splice signals in mammals

Biology direct, 2008-07, Vol.3 (1), p.30-30, Article 30

2008

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DNA molecule classification using feature primitives

BMC bioinformatics, 2006-09, Vol.7 Suppl 2 (Suppl 2), p.S15-S15, Article S15

2006

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Emanator theory using split octonions is manifestly Lorentz invariant and reveals why the fundamental constant ℏ should be so small

Advanced Studies in Theoretical Physics, 2023, Vol.17 (3), p.87-108

Winters-Hilt, Stephen

2023

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Emanator theory is shown to be an optimal martingale process at the fractal edge of chaos, where the gravitational constant G is hypothesized to be a multiscale fractal coupling parameter

Advanced Studies in Theoretical Physics, 2023, Vol.17 (2), p.73-85

Winters-Hilt, Stephen

2023

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Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

BMC bioinformatics, 2008-08, Vol.9 Suppl 9 (S9), p.S1-S1, Article S1

2008

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Chiral trigintaduonion emanation leads to the standard model of particle physics and to quantum matter

Advanced Studies in Theoretical Physics, 2022, Vol.16 (3), p.83-113

Winters-Hilt, Stephen

2022

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Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society

BMC bioinformatics, 2007-11, Vol.8 Suppl 7 (S7), p.S1-S1, Article S1

2007

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Fiat numero: trigintaduonion emanation theory and its relation to the fine-structure constant α, the Feigenbaum constant c∞, and π

Advanced studies in theoretical physics, 2021, Vol.15 (2), p.71-98

Winters-Hilt, Stephen

2021

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Informatics and machine learning: from Martingales to metaheuristics

Implementing EM and Viterbi algorithms for Hidden Markov Model in linear memory

Rapid discrimination among individual DNA hairpin molecules at single-nucleotide resolution using an ion channel

Nanopore Detector based analysis of single-molecule conformational kinetics and binding interactions

The NTD Nanoscope: potential applications and implementations

Analysis of nanopore detector measurements using Machine-Learning methods, with application to single-molecule kinetic analysis

A novel, fast, HMM-with-Duration implementation - for application with a new, pattern recognition informed, nanopore detector

Support vector machine implementations for classification & clustering

Discrimination among individual Watson-Crick base pairs at the termini of single DNA hairpin molecules

Alt-Splice Gene Predictor Using Multitrack-Clique Analysis: Verification of Statistical Support for Modelling in Genomes of Multicellular Eukaryotes

Duration learning for analysis of nanopore ionic current blockades

A Metastate HMM with Application to Gene Structure Identification in Eukaryotes

A Metastate HMM with Application to Gene Structure Identification in Eukaryotes

Preliminary nanopore cheminformatics analysis of aptamer-target binding strength

Informatics and Machine Learning

Nanopore-based kinetics analysis of individual antibody-channel and antibody-antigen interactions

Proceedings of the 2011 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

Accumulation of GC donor splice signals in mammals

DNA molecule classification using feature primitives

Emanator theory using split octonions is manifestly Lorentz invariant and reveals why the fundamental constant ℏ should be so small

Emanator theory is shown to be an optimal martingale process at the fractal edge of chaos, where the gravitational constant G is hypothesized to be a multiscale fractal coupling parameter

Proceedings of the 2008 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference

Chiral trigintaduonion emanation leads to the standard model of particle physics and to quantum matter

Proceedings of the Fourth Annual Conference of the MidSouth Computational Biology and Bioinformatics Society

Fiat numero: trigintaduonion emanation theory and its relation to the fine-structure constant α, the Feigenbaum constant c∞, and π

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