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Deep Sequencing Reveals Minor Protease Resistance Mutations in Patients Failing a Protease Inhibitor Regimen

Journal of Virology, 2012-06, Vol.86 (11), p.6231-6237

2012

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A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses

Genetics (Austin), 2006-05, Vol.173 (1), p.9-23

2006

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Phylogenetic relationships of the marine Haplosclerida (Phylum Porifera) employing ribosomal (28S rRNA) and mitochondrial (cox1, nad1) gene sequence data

PloS one, 2011-09, Vol.6 (9), p.e24344-e24344

2011

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Antagonistic effects of finerenone and spironolactone on the aldosterone‐regulated transcriptome of human kidney cells

The FASEB journal, 2021-02, Vol.35 (2), p.e21314-n/a

2021

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The influence of N-linked glycans on the molecular dynamics of the HIV-1 gp120 V3 loop

PloS one, 2013-11, Vol.8 (11), p.e80301-e80301

2013

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How to Monitor Hydration Status and Urine Dilution in Patients with Nephrolithiasis

Nutrients, 2023-03, Vol.15 (7), p.1642

2023

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Functional Coevolutionary Networks of the Hsp70-Hop-Hsp90 System Revealed through Computational Analyses

Molecular biology and evolution, 2007-04, Vol.24 (4), p.1032-1044

2007

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Urinary steroidomic profiles by LC-MS/MS to monitor classic 21-Hydroxylase deficiency

The Journal of steroid biochemistry and molecular biology, 2020-04, Vol.198, p.105553-105553, Article 105553

2020

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Ability to develop broadly neutralizing HIV-1 antibodies is not restricted by the germline Ig gene repertoire

The Journal of immunology (1950), 2015-05, Vol.194 (9), p.4371-4378

2015

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Criteria for diagnosing primary aldosteronism on the basis of liquid chromatography–tandem mass spectrometry determinations of plasma aldosterone concentration

Journal of hypertension, 2018-07, Vol.36 (7), p.1592-1601

2018

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Structural Rearrangements Maintain the Glycan Shield of an HIV-1 Envelope Trimer After the Loss of a Glycan

Scientific reports, 2018-10, Vol.8 (1), p.15031-15, Article 15031

2018

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A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes

Molecular biology and evolution, 2007-12, Vol.24 (12), p.2787-2801

2007

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Characterizing the Diverse Mutational Pathways Associated with R5-Tropic Maraviroc Resistance: HIV-1 That Uses the Drug-Bound CCR5 Coreceptor

Journal of virology, 2015-11, Vol.89 (22), p.11457-11472

2015

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Hydration for Adult Patients with Nephrolithiasis: Specificities and Current Recommendations

Nutrients, 2023-11, Vol.15 (23), p.4885

2023

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RAMICS: trainable, high-speed and biologically relevant alignment of high-throughput sequencing reads to coding DNA

Nucleic acids research, 2014-07, Vol.42 (13), p.e106

2014

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Trends in Genotypic HIV-1 Antiretroviral Resistance between 2006 and 2012 in South African Patients Receiving First- and Second-Line Antiretroviral Treatment Regimens

PloS one, 2013-06, Vol.8 (6), p.e67188-e67188

2013

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Appraising the performance of genotyping tools in the prediction of coreceptor tropism in HIV-1 subtype C viruses

BMC infectious diseases, 2012-09, Vol.12 (1), p.203-203, Article 203

2012

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Chinks in the armor of the HIV-1 Envelope glycan shield: Implications for immune escape from anti-glycan broadly neutralizing antibodies

Virology (New York, N.Y.), 2017-01, Vol.501, p.12-24

2017

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Evidence for Heterogeneous Selective Pressures in the Evolution of the env Gene in Different Human Immunodeficiency Virus Type 1 Subtypes

Journal of Virology, 2005-02, Vol.79 (3), p.1836-1841

2005

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Characterizing the emergence and persistence of drug resistant mutations in HIV-1 subtype C infections using 454 ultra deep pyrosequencing

BMC infectious diseases, 2013-01, Vol.13 (1), p.52-52, Article 52

2013

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Emergence, dominance, and possible decline of CXCR4 chemokine receptor usage during the course of HIV infection

Journal of medical virology, 2010-12, Vol.82 (12), p.2004-2012

2010

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QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform

BMC bioinformatics, 2014-01, Vol.15 (1), p.33-33, Article 33

2014

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Timing and Reconstruction of the Most Recent Common Ancestor of the Subtype C Clade of Human Immunodeficiency Virus Type 1

Journal of Virology, 2004-10, Vol.78 (19), p.10501-10506

2004

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HIV infection in high school students in rural South Africa: role of transmissions among students

AIDS research and human retroviruses, 2014-10, Vol.30 (10), p.956

2014

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Does a tree–like phylogeny only exist at the tips in the prokaryotes?

Proceedings of the Royal Society. B, Biological sciences, 2004-12, Vol.271 (1557), p.2551-2558

2004

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Deep Sequencing Reveals Minor Protease Resistance Mutations in Patients Failing a Protease Inhibitor Regimen

A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses

Phylogenetic relationships of the marine Haplosclerida (Phylum Porifera) employing ribosomal (28S rRNA) and mitochondrial (cox1, nad1) gene sequence data

Antagonistic effects of finerenone and spironolactone on the aldosterone‐regulated transcriptome of human kidney cells

The influence of N-linked glycans on the molecular dynamics of the HIV-1 gp120 V3 loop

How to Monitor Hydration Status and Urine Dilution in Patients with Nephrolithiasis

Functional Coevolutionary Networks of the Hsp70-Hop-Hsp90 System Revealed through Computational Analyses

Urinary steroidomic profiles by LC-MS/MS to monitor classic 21-Hydroxylase deficiency

Ability to develop broadly neutralizing HIV-1 antibodies is not restricted by the germline Ig gene repertoire

Criteria for diagnosing primary aldosteronism on the basis of liquid chromatography–tandem mass spectrometry determinations of plasma aldosterone concentration

Structural Rearrangements Maintain the Glycan Shield of an HIV-1 Envelope Trimer After the Loss of a Glycan

A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes

Characterizing the Diverse Mutational Pathways Associated with R5-Tropic Maraviroc Resistance: HIV-1 That Uses the Drug-Bound CCR5 Coreceptor

Hydration for Adult Patients with Nephrolithiasis: Specificities and Current Recommendations

RAMICS: trainable, high-speed and biologically relevant alignment of high-throughput sequencing reads to coding DNA

Trends in Genotypic HIV-1 Antiretroviral Resistance between 2006 and 2012 in South African Patients Receiving First- and Second-Line Antiretroviral Treatment Regimens

Appraising the performance of genotyping tools in the prediction of coreceptor tropism in HIV-1 subtype C viruses

Chinks in the armor of the HIV-1 Envelope glycan shield: Implications for immune escape from anti-glycan broadly neutralizing antibodies

Evidence for Heterogeneous Selective Pressures in the Evolution of the env Gene in Different Human Immunodeficiency Virus Type 1 Subtypes

Characterizing the emergence and persistence of drug resistant mutations in HIV-1 subtype C infections using 454 ultra deep pyrosequencing

Emergence, dominance, and possible decline of CXCR4 chemokine receptor usage during the course of HIV infection

QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform

Timing and Reconstruction of the Most Recent Common Ancestor of the Subtype C Clade of Human Immunodeficiency Virus Type 1

HIV infection in high school students in rural South Africa: role of transmissions among students

Does a tree–like phylogeny only exist at the tips in the prokaryotes?

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