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Analysis of the SARS-CoV-2 spike protein glycan shield reveals implications for immune recognition

Scientific reports, 2020-09, Vol.10 (1), p.14991-14991, Article 14991

2020

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Knee osteoarthritis has doubled in prevalence since the mid-20th century

Proceedings of the National Academy of Sciences - PNAS, 2017-08, Vol.114 (35), p.9332-9336

2017

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Characterization of heparin and severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) spike glycoprotein binding interactions

Antiviral research, 2020-09, Vol.181, p.104873-104873, Article 104873

2020

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Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor

Cell host & microbe, 2020-10, Vol.28 (4), p.586-601.e6

2020

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How to Use a Chemotherapeutic Agent When Resistance to It Threatens the Patient

PLoS biology, 2017-02, Vol.15 (2), p.e2001110-e2001110

2017

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Updates to the Symbol Nomenclature for Glycans guidelines

Glycobiology (Oxford), 2019-08, Vol.29 (9), p.620-624

2019

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Protein–Ligand CH−π Interactions: Structural Informatics, Energy Function Development, and Docking Implementation

Journal of chemical theory and computation, 2023-08, Vol.19 (16), p.5503-5515

2023

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Molecular simulations of carbohydrates and protein–carbohydrate interactions: motivation, issues and prospects

Drug discovery today, 2010-08, Vol.15 (15), p.596-609

2010

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Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity

Cell host & microbe, 2017-01, Vol.21 (1), p.23-34

2017

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A speed-fidelity trade-off determines the mutation rate and virulence of an RNA virus

PLoS biology, 2018-06, Vol.16 (6), p.e2006459-e2006459

2018

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Predicting the Structures of Glycans, Glycoproteins, and Their Complexes

Chemical reviews, 2018-09, Vol.118 (17), p.8005-8024

Woods, Robert J

2018

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Stochastic processes constrain the within and between host evolution of influenza virus

eLife, 2018-05, Vol.7

2018

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Quantitative Protein Topography Measurements by High Resolution Hydroxyl Radical Protein Footprinting Enable Accurate Molecular Model Selection

Scientific reports, 2017-07, Vol.7 (1), p.4552-11, Article 4552

2017

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MA’AT Analysis: Probability Distributions of Molecular Torsion Angles in Solution from NMR Spectroscopy

Accounts of chemical research, 2023-09, Vol.56 (17), p.2313-2328

2023

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GLYCAM06: A generalizable biomolecular force field. Carbohydrates

Journal of computational chemistry, 2008-03, Vol.29 (4), p.622-655

2008

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Simplifying the detection and monitoring of protein glycosylation during in vitro glycoengineering

Scientific reports, 2023-01, Vol.13 (1), p.567-567, Article 567

2023

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O-glycosylation on cerebrospinal fluid and plasma apolipoprotein E differs in the lipid-binding domain

Glycobiology (Oxford), 2020-01, Vol.30 (2), p.74-85

2020

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PD-L1 Glycosylation and Its Impact on Binding to Clinical Antibodies

Journal of proteome research, 2021-01, Vol.20 (1), p.485-497

2021

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Integrated Omics and Computational Glycobiology Reveal Structural Basis for Influenza A Virus Glycan Microheterogeneity and Host Interactions

Molecular & cellular proteomics, 2016-06, Vol.15 (6), p.1895-1912

2016

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The Amber biomolecular simulation programs

Journal of computational chemistry, 2005-12, Vol.26 (16), p.1668-1688

2005

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Unraveling Cellulose Microfibrils: A Twisted Tale

Biopolymers, 2013-10, Vol.99 (10), p.746-756

2013

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Computational glycoscience: characterizing the spatial and temporal properties of glycans and glycan–protein complexes

Current opinion in structural biology, 2010-10, Vol.20 (5), p.575-583

2010

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Daptomycin treatment impacts resistance in off-target populations of vancomycin-resistant Enterococcus faecium

PLoS biology, 2020-12, Vol.18 (12), p.e3000987-e3000987

2020

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Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaff

Journal of computational chemistry, 2014-03, Vol.35 (7), p.526-539

2014

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Analysis of the SARS-CoV-2 spike protein glycan shield reveals implications for immune recognition

Knee osteoarthritis has doubled in prevalence since the mid-20th century

Characterization of heparin and severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) spike glycoprotein binding interactions

Virus-Receptor Interactions of Glycosylated SARS-CoV-2 Spike and Human ACE2 Receptor

How to Use a Chemotherapeutic Agent When Resistance to It Threatens the Patient

Updates to the Symbol Nomenclature for Glycans guidelines

Protein–Ligand CH−π Interactions: Structural Informatics, Energy Function Development, and Docking Implementation

Molecular simulations of carbohydrates and protein–carbohydrate interactions: motivation, issues and prospects

Recent H3N2 Viruses Have Evolved Specificity for Extended, Branched Human-type Receptors, Conferring Potential for Increased Avidity

A speed-fidelity trade-off determines the mutation rate and virulence of an RNA virus

Predicting the Structures of Glycans, Glycoproteins, and Their Complexes

Stochastic processes constrain the within and between host evolution of influenza virus

Quantitative Protein Topography Measurements by High Resolution Hydroxyl Radical Protein Footprinting Enable Accurate Molecular Model Selection

MA’AT Analysis: Probability Distributions of Molecular Torsion Angles in Solution from NMR Spectroscopy

GLYCAM06: A generalizable biomolecular force field. Carbohydrates

GlyGen: Computational and Informatics Resources for Glycoscience

Simplifying the detection and monitoring of protein glycosylation during in vitro glycoengineering

O-glycosylation on cerebrospinal fluid and plasma apolipoprotein E differs in the lipid-binding domain

PD-L1 Glycosylation and Its Impact on Binding to Clinical Antibodies

Integrated Omics and Computational Glycobiology Reveal Structural Basis for Influenza A Virus Glycan Microheterogeneity and Host Interactions

The Amber biomolecular simulation programs

Unraveling Cellulose Microfibrils: A Twisted Tale

Computational glycoscience: characterizing the spatial and temporal properties of glycans and glycan–protein complexes

Daptomycin treatment impacts resistance in off-target populations of vancomycin-resistant Enterococcus faecium

Importance of ligand conformational energies in carbohydrate docking: Sorting the wheat from the chaff

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