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Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals

Nature communications, 2015-08, Vol.6 (1), p.8018-8018, Article 8018

2015

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Japonica array: improved genotype imputation by designing a population-specific SNP array with 1070 Japanese individuals

Journal of human genetics, 2015-10, Vol.60 (10), p.581-587

2015

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Uncertainty Quantification of Predictions in Machine Learning

Medical Imaging and Information Sciences, 2023, Vol.40(4), pp.75-78

Mimori, Takahiro

2023

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HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data

BMC genomics, 2015-01, Vol.16 Suppl 2 (S2), p.S7-S7, Article S7

2015

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Analysis of Genetic Polymorphism of Bitter Taste Receptor TAS2R38 and TAS2R46, and Its Relationship with Eating and Drinking Habits in Japanese ToMMo Subjects

Journal of Nutritional Science and Vitaminology, 2023/10/31, Vol.69(5), pp.347-356

2023

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Genome analyses for the Tohoku Medical Megabank Project towards establishment of personalized healthcare

Journal of biochemistry (Tokyo), 2019-02, Vol.165 (2), p.139-158

2019

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CD45 + CD326 + Cells are Predictive of Poor Prognosis in Non-Small Cell Lung Cancer Patients

Clinical cancer research, 2019-11, Vol.25 (22), p.6756-6763

2019

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AP-SKAT: highly-efficient genome-wide rare variant association test

BMC genomics, 2016-09, Vol.17 (1), p.745-745, Article 745

2016

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HLA-VBSeq v2: improved HLA calling accuracy with full-length Japanese class-I panel

Human genome variation, 2019-06, Vol.6 (1), p.29-29, Article 29

2019

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SUGAR: graphical user interface-based data refiner for high-throughput DNA sequencing

BMC genomics, 2014-08, Vol.15 (1), p.664-664, Article 664

2014

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iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data

BMC systems biology, 2013-12, Vol.7 Suppl 6 (S6), p.S8-S8, Article S8

2013

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HapMonster: A Statistically Unified Approach for Variant Calling and Haplotyping Based on Phase-Informative Reads

Algorithms for Computational Biology, p.107-118

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Construction of JRG (Japanese reference genome) with single-molecule real-time sequencing

Human genome variation, 2019-06, Vol.6 (1), p.27-27, Article 27

2019

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Identification of In-droplet Multicellular Communities by Light-induced Combinatorial DNA Barcoding

Chemistry : a European journal, 2023-09, Vol.29 (53), p.e202301133-e202301133

2023

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STR-realigner: a realignment method for short tandem repeat regions

BMC genomics, 2016-12, Vol.17 (1), p.991-991, Article 991

2016

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Novel metric for hyperbolic phylogenetic tree embeddings

Biology methods and protocols, 2021, Vol.6 (1), p.bpab006-bpab006

2021

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Computational Design of Synthetic Optical Barcodes in Microdroplets

Advanced optical materials, 2024-04, Vol.12 (12), p.n/a

2024

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A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes

BMC genomics, 2016-01, Vol.17 Suppl 1 (7), p.2-2, Article 2

2016

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Analysis of genetic polymorphism of bitter taste receptor TAS2R19 and its relationship with alcohol drinking and eating habits in Japanese subjects

Annals of nutrition and metabolism, 2023-08, Vol.79, p.451

2023

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機械学習における予測の不確実性定量化

医用画像情報学会雑誌, 2023, Vol.40(4), pp.75-78

三森, 隆広

2023

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TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads

BMC genomics, 2014-12, Vol.15 Suppl 10 (S10), p.S5-S5, Article S5

2014

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Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree

BMC genomics, 2016-08, Vol.17 Suppl 5 (Suppl 5), p.494-494, Article 494

2016

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Analysis of Genetic Polymorphism of Bitter Taste Receptor TAS2R38 and TAS2R46, and Its Relationship with Eating and Drinking Habits in Japanese ToMMo Subjects

Journal of Japan Society of Nutrition and Food Science, 2023-12, Vol.76 (6), p.405-405

2023

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A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads

Bioinformatics, 2013-11, Vol.29 (22), p.2835-2843

2013

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Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals

Japonica array: improved genotype imputation by designing a population-specific SNP array with 1070 Japanese individuals

Uncertainty Quantification of Predictions in Machine Learning

HLA-VBSeq: accurate HLA typing at full resolution from whole-genome sequencing data

Analysis of Genetic Polymorphism of Bitter Taste Receptor TAS2R38 and TAS2R46, and Its Relationship with Eating and Drinking Habits in Japanese ToMMo Subjects

Genome analyses for the Tohoku Medical Megabank Project towards establishment of personalized healthcare

CD45 + CD326 + Cells are Predictive of Poor Prognosis in Non-Small Cell Lung Cancer Patients

AP-SKAT: highly-efficient genome-wide rare variant association test

HLA-VBSeq v2: improved HLA calling accuracy with full-length Japanese class-I panel

SUGAR: graphical user interface-based data refiner for high-throughput DNA sequencing

iSVP: an integrated structural variant calling pipeline from high-throughput sequencing data

HapMonster: A Statistically Unified Approach for Variant Calling and Haplotyping Based on Phase-Informative Reads

Maternity Log study: a longitudinal lifelog monitoring and multiomics analysis for the early prediction of complicated pregnancy

Construction of JRG (Japanese reference genome) with single-molecule real-time sequencing

Identification of In-droplet Multicellular Communities by Light-induced Combinatorial DNA Barcoding

STR-realigner: a realignment method for short tandem repeat regions

Novel metric for hyperbolic phylogenetic tree embeddings

Computational Design of Synthetic Optical Barcodes in Microdroplets

A Bayesian approach for estimating allele-specific expression from RNA-Seq data with diploid genomes

Analysis of genetic polymorphism of bitter taste receptor TAS2R19 and its relationship with alcohol drinking and eating habits in Japanese subjects

機械学習における予測の不確実性定量化

TIGAR2: sensitive and accurate estimation of transcript isoform expression with longer RNA-Seq reads

Short tandem repeat number estimation from paired-end reads for multiple individuals by considering coalescent tree

Analysis of Genetic Polymorphism of Bitter Taste Receptor TAS2R38 and TAS2R46, and Its Relationship with Eating and Drinking Habits in Japanese ToMMo Subjects

A statistical variant calling approach from pedigree information and local haplotyping with phase informative reads

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