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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

BMC bioinformatics, 2009-02, Vol.10 (1), p.48-48, Article 48

2009

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Global Transcriptional Response to CRISPR/Cas9-AAV6-Based Genome Editing in CD34+ Hematopoietic Stem and Progenitor Cells

Molecular therapy, 2018-10, Vol.26 (10), p.2431-2442

2018

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EXPANDER--an integrative program suite for microarray data analysis

BMC bioinformatics, 2005-09, Vol.6 (1), p.232-232, Article 232

2005

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Novel rank-based statistical methods reveal microRNAs with differential expression in multiple cancer types

PloS one, 2009-11, Vol.4 (11), p.e8003-e8003

2009

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Global methylation patterns in idiopathic pulmonary fibrosis

PloS one, 2012-04, Vol.7 (4), p.e33770-e33770

2012

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miRNA-mRNA integrated analysis reveals roles for miRNAs in primary breast tumors

PloS one, 2011-02, Vol.6 (2), p.e16915-e16915

2011

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A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription

Nature genetics, 2007-03, Vol.39 (3), p.303-309

2007

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Identifying in-trans process associated genes in breast cancer by integrated analysis of copy number and expression data

PloS one, 2013-01, Vol.8 (1), p.e53014-e53014

2013

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Small deletion variants have stable breakpoints commonly associated with alu elements

PloS one, 2008-08, Vol.3 (8), p.e3104

2008

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Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells

Nature biotechnology, 2015-09, Vol.33 (9), p.985-989

2015

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Developmental programming of CpG island methylation profiles in the human genome

Nature structural & molecular biology, 2009-05, Vol.16 (5), p.564-571

2009

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Improving CRISPR-Cas specificity with chemical modifications in single-guide RNAs

Nucleic acids research, 2018-01, Vol.46 (2), p.792-803

2018

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Correction: miRNA-mRNA Integrated Analysis Reveals Roles for miRNAs in Primary Breast Tumors

PloS one, 2013-09, Vol.8 (9)

2013

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miRNA target enrichment analysis reveals directly active miRNAs in health and disease

Nucleic acids research, 2013-02, Vol.41 (3), p.e45-e45

2013

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Molecular Rules Governing De Novo Methylation in Cancer

Cancer research (Chicago, Ill.), 2014-03, Vol.74 (5), p.1475-1483

2014

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Phosphonoacetate Modifications Enhance the Stability and Editing Yields of Guide RNAs for Cas9 Editors

Biochemistry (Easton), 2023-12, Vol.62 (24), p.3512-3520

2023

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Association of N‑Glycosylation with Breast Carcinoma and Systemic Features Using High-Resolution Quantitative UPLC

Journal of proteome research, 2014-05, Vol.13 (5), p.2314-2327

2014

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The Fine-Scale and Complex Architecture of Human Copy-Number Variation

American journal of human genetics, 2008-03, Vol.82 (3), p.685-695

2008

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Deregulation of cancer-related miRNAs is a common event in both benign and malignant human breast tumors

Carcinogenesis (New York), 2014-01, Vol.35 (1), p.76-85

2014

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ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types

Bioinformatics, 2015-05, Vol.31 (10), p.1683-1685

2015

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EGF decreases the abundance of microRNAs that restrain oncogenic transcription factors

Science signaling, 2010-06, Vol.3 (124), p.ra43

2010

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Serum N-glycan analysis in breast cancer patients – Relation to tumour biology and clinical outcome

Molecular oncology, 2016-01, Vol.10 (1), p.59-72

2016

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Specific genomic and transcriptomic aberrations in tumors induced by partial hepatectomy of a chronically inflamed murine liver

Oncotarget, 2014-11, Vol.5 (21), p.10318-10331

2014

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Integrative analysis of genome-wide experiments in the context of a large high-throughput data compendium

Molecular systems biology, 2005, Vol.1 (1), p.2005.0002-n/a

2005

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Clinically driven semi-supervised class discovery in gene expression data

Bioinformatics, 2008-08, Vol.24 (16), p.i90-i97

2008

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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

Global Transcriptional Response to CRISPR/Cas9-AAV6-Based Genome Editing in CD34+ Hematopoietic Stem and Progenitor Cells

EXPANDER--an integrative program suite for microarray data analysis

Novel rank-based statistical methods reveal microRNAs with differential expression in multiple cancer types

Global methylation patterns in idiopathic pulmonary fibrosis

miRNA-mRNA integrated analysis reveals roles for miRNAs in primary breast tumors

A genome-wide analysis in Saccharomyces cerevisiae demonstrates the influence of chromatin modifiers on transcription

Identifying in-trans process associated genes in breast cancer by integrated analysis of copy number and expression data

Small deletion variants have stable breakpoints commonly associated with alu elements

Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells

Developmental programming of CpG island methylation profiles in the human genome

Improving CRISPR-Cas specificity with chemical modifications in single-guide RNAs

Correction: miRNA-mRNA Integrated Analysis Reveals Roles for miRNAs in Primary Breast Tumors

miRNA target enrichment analysis reveals directly active miRNAs in health and disease

Molecular Rules Governing De Novo Methylation in Cancer

Phosphonoacetate Modifications Enhance the Stability and Editing Yields of Guide RNAs for Cas9 Editors

Association of N‑Glycosylation with Breast Carcinoma and Systemic Features Using High-Resolution Quantitative UPLC

The Fine-Scale and Complex Architecture of Human Copy-Number Variation

Deregulation of cancer-related miRNAs is a common event in both benign and malignant human breast tumors

ENViz: a Cytoscape App for integrated statistical analysis and visualization of sample-matched data with multiple data types

EGF decreases the abundance of microRNAs that restrain oncogenic transcription factors

Serum N-glycan analysis in breast cancer patients – Relation to tumour biology and clinical outcome

Specific genomic and transcriptomic aberrations in tumors induced by partial hepatectomy of a chronically inflamed murine liver

Integrative analysis of genome-wide experiments in the context of a large high-throughput data compendium

Clinically driven semi-supervised class discovery in gene expression data

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