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Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models

BMC bioinformatics, 2023-11, Vol.24 (1), p.412-412, Article 412

2023

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Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008778-e1008778

2021

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Effects of an In Vivo Vaping Challenge on In Vitro Interleukin-6 Biosynthesis Pathways in Arterial Endothelial Cells Derived From Human Embryonic Stem Cells

Journal of the American Heart Association, 2023-07, Vol.12 (14), p.e030139-e030139

2023

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Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics

PLoS computational biology, 2019-12, Vol.15 (12), p.e1007543-e1007543

2019

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A Genome-wide Analysis of Human Pluripotent Stem Cell-Derived Endothelial Cells in 2D or 3D Culture

Stem cell reports, 2017-04, Vol.8 (4), p.907-918

2017

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KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications [version 1; peer review: 1 approved, 1 approved with reservations]

F1000 research, 2020, Vol.9, p.832

2020

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Abstract 13269: Effects of Nicotine-Containing Product Challenges on Interleukin-6 Pathway Expression in Human Pluripotent-Derived Arterial Endothelial Cells: The Clues Study

Circulation (New York, N.Y.), 2022-11, Vol.146 (Suppl_1)

2022

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Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol

Methods in molecular biology (Clifton, N.J.), 2020-01, Vol.2074, p.13

2020

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Generation of anti-GD2 CAR macrophages from human pluripotent stem cells for cancer immunotherapies

Stem cell reports, 2023-02, Vol.18 (2), p.585-596

2023

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KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications [version 2; peer review: 2 approved]

F1000 research, 2021, Vol.9, p.832-832

2021

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Efficient derivation of transgene-free porcine induced pluripotent stem cells enables in vitro modeling of species-specific developmental timing

Stem cell reports, 2023-12, Vol.18 (12), p.2328-2343

2023

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A Simple Text Mining Approach for Ranking Pairwise Associations in Biomedical Applications

AMIA Summits on Translational Science proceedings, 2017, Vol.2017, p.166-174

2017

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Parallel and Serial Applications of the RETRAN-03 Power Plant Simulation Code Using Domain Decomposition and Krylov Subspace Methods

Nuclear technology, 1997-02, Vol.117 (2), p.133-150

1997

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Vibrational properties of anhydrous and partially hydrated uranyl fluoride

The Journal of chemical physics, 2017-01, Vol.146 (2), p.024502-024502

2017

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Structural characterization by infrared multiple photon dissociation spectroscopy of protonated gas-phase ions obtained by electrospray ionization of cysteine and dopamine

Analytical and bioanalytical chemistry, 2011-03, Vol.399 (7), p.2463-2473

2011

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On the path to glycan conformer identification: Gas-phase study of the anomers of methyl glycosides of N-acetyl-d-glucosamine and N-acetyl-d-galactosamine

International journal of mass spectrometry, 2012-12, Vol.330-332, p.285-294

2012

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Direct evidence for the ring opening of monosaccharide anions in the gas phase: photodissociation of aldohexoses and aldohexoses derived from disaccharides using variable-wavelength infrared irradiation in the carbonyl stretch region

Carbohydrate research, 2011-11, Vol.346 (15), p.2469-2481

2011

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Gas-phase infrared multiple photon dissociation spectroscopy of isolated SF6- and SF5- anions

The Journal of chemical physics, 2008-12, Vol.129 (24), p.244302-244302

2008

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Structural Elucidation of Direct Analysis in Real Time Ionized Nerve Agent Simulants with Infrared Multiple Photon Dissociation Spectroscopy

Analytical chemistry (Washington), 2011-06, Vol.83 (11), p.4045-4052

2011

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Triuret as a potential hypokalemic agent: Structure characterization of triuret and triuret–alkali metal adducts by mass spectrometric techniques

Archives of biochemistry and biophysics, 2010-06, Vol.498 (1), p.23-34

2010

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Gas-phase infrared multiple photon dissociation spectroscopy of isolated SF 6 − and SF 5 − anions

The Journal of chemical physics, 2008-12, Vol.129 (24), p.244302-244302-8

2008

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Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models

Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells

Effects of an In Vivo Vaping Challenge on In Vitro Interleukin-6 Biosynthesis Pathways in Arterial Endothelial Cells Derived From Human Embryonic Stem Cells

Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics

A Genome-wide Analysis of Human Pluripotent Stem Cell-Derived Endothelial Cells in 2D or 3D Culture

KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications [version 1; peer review: 1 approved, 1 approved with reservations]

Abstract 13269: Effects of Nicotine-Containing Product Challenges on Interleukin-6 Pathway Expression in Human Pluripotent-Derived Arterial Endothelial Cells: The Clues Study

Automated Extraction and Visualization of Protein-Protein Interaction Networks and Beyond: A Text-Mining Protocol

Generation of anti-GD2 CAR macrophages from human pluripotent stem cells for cancer immunotherapies

A High-Quality Blue Whale Genome, Segmental Duplications, and Historical Demography

KinderMiner Web: a simple web tool for ranking pairwise associations in biomedical applications [version 2; peer review: 2 approved]

Efficient derivation of transgene-free porcine induced pluripotent stem cells enables in vitro modeling of species-specific developmental timing

A Simple Text Mining Approach for Ranking Pairwise Associations in Biomedical Applications

Parallel and Serial Applications of the RETRAN-03 Power Plant Simulation Code Using Domain Decomposition and Krylov Subspace Methods

Vibrational properties of anhydrous and partially hydrated uranyl fluoride

Structural characterization by infrared multiple photon dissociation spectroscopy of protonated gas-phase ions obtained by electrospray ionization of cysteine and dopamine

On the path to glycan conformer identification: Gas-phase study of the anomers of methyl glycosides of N-acetyl-d-glucosamine and N-acetyl-d-galactosamine

Direct evidence for the ring opening of monosaccharide anions in the gas phase: photodissociation of aldohexoses and aldohexoses derived from disaccharides using variable-wavelength infrared irradiation in the carbonyl stretch region

Gas-phase infrared multiple photon dissociation spectroscopy of isolated SF6- and SF5- anions

Structural Elucidation of Direct Analysis in Real Time Ionized Nerve Agent Simulants with Infrared Multiple Photon Dissociation Spectroscopy

Triuret as a potential hypokalemic agent: Structure characterization of triuret and triuret–alkali metal adducts by mass spectrometric techniques

Gas-phase infrared multiple photon dissociation spectroscopy of isolated SF 6 − and SF 5 − anions

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