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Microsatellite instability status determined by next‐generation sequencing and compared with PD‐L1 and tumor mutational burden in 11,348 patients

Cancer medicine (Malden, MA), 2018-03, Vol.7 (3), p.746-756

2018

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Mutational burden, immune checkpoint expression, and mismatch repair in glioma: implications for immune checkpoint immunotherapy

Neuro-oncology (Charlottesville, Va.), 2017-08, Vol.19 (8), p.1047-1057

2017

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Clinical Validation of a Machine-learning-derived Signature Predictive of Outcomes from First-line Oxaliplatin-based Chemotherapy in Advanced Colorectal Cancer

Clinical cancer research, 2021-02, Vol.27 (4), p.1174-1183

2021

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Immune evasion in HPV⁻ head and neck precancer–cancer transition is driven by an aneuploid switch involving chromosome 9p loss

Proceedings of the National Academy of Sciences - PNAS, 2021-05, Vol.118 (19), p.1-12

2021

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Elastic coupling power stroke mechanism of the F₁-ATPase molecular motor

Proceedings of the National Academy of Sciences - PNAS, 2018-05, Vol.115 (22), p.5750-5755

2018

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Homologous Recombination Deficiency Alterations in Colorectal Cancer: Clinical, Molecular, and Prognostic Implications

JNCI : Journal of the National Cancer Institute, 2022-02, Vol.114 (2), p.271-279

2022

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Immune checkpoint blockade as a potential therapeutic target: surveying CNS malignancies

Neuro-oncology (Charlottesville, Va.), 2016-10, Vol.18 (10), p.1357-1366

2016

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Somatic 9p24.1 alterations in HPV - head and neck squamous cancer dictate immune microenvironment and anti-PD-1 checkpoint inhibitor activity

Proceedings of the National Academy of Sciences - PNAS, 2022-11, Vol.119 (47), p.e2213835119-e2213835119

2022

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Molecular Profiling of the Metaplastic Spindle Cell Carcinoma of the Breast Reveals Potentially Targetable Biomarkers

Clinical breast cancer, 2020-08, Vol.20 (4), p.326-331.e1

2020

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Direct observation of stepped proteolipid ring rotation in E. coli FoF1-ATP synthase

The EMBO journal, 2010-12, Vol.29 (23), p.3911-3923

2010

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Pan-tumor survey of ROS1 fusions detected by next-generation RNA and whole transcriptome sequencing

BMC cancer, 2023-10, Vol.23 (1), p.1-1000, Article 1000

2023

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Profiling plasma extracellular vesicle by pluronic block-copolymer based enrichment method unveils features associated with breast cancer aggression, metastasis and invasion

Journal of extracellular vesicles, 2018-12, Vol.7 (1), p.1458574-n/a

2018

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Machine learning analysis using 77,044 genomic and transcriptomic profiles to accurately predict tumor type

Translational oncology, 2021-03, Vol.14 (3), p.101016-101016, Article 101016

2021

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Response to “The need for validation of MI GPSai in patients with CUP: Comment on: “Machine learning analysis using 77,044 genomic and transcriptomic profiles to accurately predict tumor type” by J Abraham et al.

Translational oncology, 2021-08, Vol.14 (8), p.101093-101093, Article 101093

2021

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Poly-ligand profiling differentiates trastuzumab-treated breast cancer patients according to their outcomes

Nature communications, 2018-03, Vol.9 (1), p.1219-9, Article 1219

2018

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Pan-tumor survey of RET fusions as detected by next-generation RNA sequencing identified RET fusion positive colorectal carcinoma as a unique molecular subset

Translational oncology, 2023-10, Vol.36, p.101744-101744, Article 101744

2023

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BRCA1/2 Reversion Mutations in Patients Treated with Poly ADP-Ribose Polymerase (PARP) Inhibitors or Platinum Agents

Medicina (Kaunas, Lithuania), 2022-12, Vol.58 (12), p.1818

2022

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Microsecond Time Scale Rotation Measurements of Single F1-ATPase Molecules

Biochemistry (Easton), 2006-03, Vol.45 (10), p.3117-3124

2006

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Pan-cancer analysis of RNA expression of ANGIOTENSIN-I-CONVERTING ENZYME 2 reveals high variability and possible impact on COVID-19 clinical outcomes

Scientific reports, 2021-03, Vol.11 (1), p.5639-5639, Article 5639

2021

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Multi-platform molecular profiling of a large cohort of glioblastomas reveals potential therapeutic strategies

Oncotarget, 2016-04, Vol.7 (16), p.21556-21569

2016

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Health Disparities among Patients with Cancer Who Received Molecular Testing for Biomarker-Directed Therapy

Cancer research communications, 2024-10, Vol.4 (10), p.2598-2609

2024

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Population bias in somatic measurement of microsatellite instability status

Cancer medicine (Malden, MA), 2020-09, Vol.9 (17), p.6452-6460

2020

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Primary CNS lymphoma commonly expresses immune response biomarkers

Neuro-oncology advances, 2020-01, Vol.2 (1), p.vdaa018-vdaa018

2020

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Identification of Novel CDH1-NRG2α and F11R-NRG2α Fusions in NSCLC Plus Additional Novel NRG2α Fusions in Other Solid Tumors by Whole Transcriptome Sequencing

JTO clinical and research reports, 2021-02, Vol.2 (2), p.100132-100132, Article 100132

2021

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Microsecond resolution of single-molecule rotation catalyzed by molecular motors

Methods in molecular biology (Clifton, N.J.), 2011-01, Vol.778, p.273

2011

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Microsatellite instability status determined by next‐generation sequencing and compared with PD‐L1 and tumor mutational burden in 11,348 patients

Mutational burden, immune checkpoint expression, and mismatch repair in glioma: implications for immune checkpoint immunotherapy

Clinical Validation of a Machine-learning-derived Signature Predictive of Outcomes from First-line Oxaliplatin-based Chemotherapy in Advanced Colorectal Cancer

Immune evasion in HPV⁻ head and neck precancer–cancer transition is driven by an aneuploid switch involving chromosome 9p loss

Elastic coupling power stroke mechanism of the F₁-ATPase molecular motor

Homologous Recombination Deficiency Alterations in Colorectal Cancer: Clinical, Molecular, and Prognostic Implications

Immune checkpoint blockade as a potential therapeutic target: surveying CNS malignancies

Somatic 9p24.1 alterations in HPV - head and neck squamous cancer dictate immune microenvironment and anti-PD-1 checkpoint inhibitor activity

Molecular Profiling of the Metaplastic Spindle Cell Carcinoma of the Breast Reveals Potentially Targetable Biomarkers

Direct observation of stepped proteolipid ring rotation in E. coli FoF1-ATP synthase

Pan-tumor survey of ROS1 fusions detected by next-generation RNA and whole transcriptome sequencing

Profiling plasma extracellular vesicle by pluronic block-copolymer based enrichment method unveils features associated with breast cancer aggression, metastasis and invasion

Machine learning analysis using 77,044 genomic and transcriptomic profiles to accurately predict tumor type

Response to “The need for validation of MI GPSai in patients with CUP: Comment on: “Machine learning analysis using 77,044 genomic and transcriptomic profiles to accurately predict tumor type” by J Abraham et al.

Poly-ligand profiling differentiates trastuzumab-treated breast cancer patients according to their outcomes

Pan-tumor survey of RET fusions as detected by next-generation RNA sequencing identified RET fusion positive colorectal carcinoma as a unique molecular subset

BRCA1/2 Reversion Mutations in Patients Treated with Poly ADP-Ribose Polymerase (PARP) Inhibitors or Platinum Agents

Microsecond Time Scale Rotation Measurements of Single F1-ATPase Molecules

Pan-cancer analysis of RNA expression of ANGIOTENSIN-I-CONVERTING ENZYME 2 reveals high variability and possible impact on COVID-19 clinical outcomes

Multi-platform molecular profiling of a large cohort of glioblastomas reveals potential therapeutic strategies

Health Disparities among Patients with Cancer Who Received Molecular Testing for Biomarker-Directed Therapy

Population bias in somatic measurement of microsatellite instability status

Primary CNS lymphoma commonly expresses immune response biomarkers

Identification of Novel CDH1-NRG2α and F11R-NRG2α Fusions in NSCLC Plus Additional Novel NRG2α Fusions in Other Solid Tumors by Whole Transcriptome Sequencing

Microsecond resolution of single-molecule rotation catalyzed by molecular motors

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