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Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity

PloS one, 2013-07, Vol.8 (7), p.e68731-e68731

2013

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The proteolytic system of lactic acid bacteria revisited: a genomic comparison

BMC genomics, 2010-01, Vol.11 (1), p.36-36

2010

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Genomic diversity and versatility of Lactobacillus plantarum, a natural metabolic engineer

Microbial cell factories, 2011-08, Vol.10 Suppl 1 (Suppl 1), p.S3-S3

2011

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Comparative Genomics of Enzymes in Flavor-Forming Pathways from Amino Acids in Lactic Acid Bacteria

Applied and Environmental Microbiology, 2008-08, Vol.74 (15), p.4590-4600

2008

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Classification of the adenylation and acyl-transferase activity of NRPS and PKS systems using ensembles of substrate specific hidden Markov models

PloS one, 2013-04, Vol.8 (4), p.e62136-e62136

2013

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Safety of the Surrogate Microorganism Enterococcus faecium NRRL B-2354 for Use in Thermal Process Validation

Applied and Environmental Microbiology, 2014-03, Vol.80 (6), p.1899-1909

2014

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Epochal Evolution of GGII.4 Norovirus Capsid Proteins from 1995 to 2006

Journal of Virology, 2007-09, Vol.81 (18), p.9932-9941

2007

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LocateP: genome-scale subcellular-location predictor for bacterial proteins

BMC bioinformatics, 2008-03, Vol.9 (1), p.173-173, Article 173

2008

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LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria

BMC genomics, 2010-11, Vol.11 (1), p.651-651, Article 651

2010

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Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches

Environmental microbiology, 2010-03, Vol.12 (3), p.758-773

2010

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Complete Resequencing and Reannotation of the Lactobacillus plantarum WCFS1 Genome

Journal of Bacteriology, 2012, Vol.194 (1), p.195-196

2012

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Analysis of Growth of Lactobacillus plantarum WCFS1 on a Complex Medium Using a Genome-scale Metabolic Model

The Journal of biological chemistry, 2006-12, Vol.281 (52), p.40041-40048

2006

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Reconstructing the metabolic network of a bacterium from its genome

Trends in microbiology (Regular ed.), 2005-11, Vol.13 (11), p.550-558

2005

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In Silico Prediction of Horizontal Gene Transfer Events in Lactobacillus bulgaricus and Streptococcus thermophilus Reveals Protocooperation in Yogurt Manufacturing

Applied and Environmental Microbiology, 2009-06, Vol.75 (12), p.4120-4129

2009

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Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior

BMC genomics, 2011-08, Vol.12 (1), p.385-385, Article 385

2011

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A Novel Quality Measure and Correction Procedure for the Annotation of Microbial Translation Initiation Sites

PloS one, 2015-07, Vol.10 (7), p.e0133691-e0133691

2015

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Accelerating the reconstruction of genome-scale metabolic networks

BMC bioinformatics, 2006-06, Vol.7 (1), p.296-296, Article 296

2006

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Combining chemoinformatics with bioinformatics: in silico prediction of bacterial flavor-forming pathways by a chemical systems biology approach "reverse pathway engineering"

PloS one, 2014-01, Vol.9 (1), p.e84769-e84769

2014

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Linking Bacillus cereus Genotypes and Carbohydrate Utilization Capacity

PloS one, 2016-06, Vol.11 (6), p.e0156796

2016

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Exploring Lactobacillus plantarum Genome Diversity by Using Microarrays

Journal of Bacteriology, 2005-09, Vol.187 (17), p.6119-6127

2005

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Comparative genomics of Lactobacillus

Microbial biotechnology, 2011-05, Vol.4 (3), p.323-332

2011

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Genome Sequence of the Naturally Plasmid-Free Lactobacillus plantarum Strain NC8 (CCUG 61730)

Journal of Bacteriology, 2012-05, Vol.194 (9), p.2391-2392

2012

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Genome sequence of Lactobacillus pentosus KCA1: vaginal isolate from a healthy premenopausal woman

PloS one, 2013-03, Vol.8 (3), p.e59239

2013

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The Highly Autoaggregative and Adhesive Phenotype of the Vaginal Lactobacillus plantarum Strain CMPG5300 Is Sortase Dependent

Applied and Environmental Microbiology, 2013-08, Vol.79 (15), p.4576-4585

2013

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Complete Genome Sequence of Lactococcus lactis subsp. lactis KF147, a Plant-Associated Lactic Acid Bacterium

Journal of Bacteriology, 2010-05, Vol.192 (10), p.2649-2650

2010

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Lactobacillus paracasei comparative genomics: towards species pan-genome definition and exploitation of diversity

The proteolytic system of lactic acid bacteria revisited: a genomic comparison

Genomic diversity and versatility of Lactobacillus plantarum, a natural metabolic engineer

Comparative Genomics of Enzymes in Flavor-Forming Pathways from Amino Acids in Lactic Acid Bacteria

Classification of the adenylation and acyl-transferase activity of NRPS and PKS systems using ensembles of substrate specific hidden Markov models

Safety of the Surrogate Microorganism Enterococcus faecium NRRL B-2354 for Use in Thermal Process Validation

Epochal Evolution of GGII.4 Norovirus Capsid Proteins from 1995 to 2006

LocateP: genome-scale subcellular-location predictor for bacterial proteins

LAB-Secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of Lactic Acid Bacteria

Phenotypic and genomic diversity of Lactobacillus plantarum strains isolated from various environmental niches

Complete Resequencing and Reannotation of the Lactobacillus plantarum WCFS1 Genome

Analysis of Growth of Lactobacillus plantarum WCFS1 on a Complex Medium Using a Genome-scale Metabolic Model

Reconstructing the metabolic network of a bacterium from its genome

In Silico Prediction of Horizontal Gene Transfer Events in Lactobacillus bulgaricus and Streptococcus thermophilus Reveals Protocooperation in Yogurt Manufacturing

Comparative analyses imply that the enigmatic Sigma factor 54 is a central controller of the bacterial exterior

A Novel Quality Measure and Correction Procedure for the Annotation of Microbial Translation Initiation Sites

Accelerating the reconstruction of genome-scale metabolic networks

Combining chemoinformatics with bioinformatics: in silico prediction of bacterial flavor-forming pathways by a chemical systems biology approach "reverse pathway engineering"

Linking Bacillus cereus Genotypes and Carbohydrate Utilization Capacity

Exploring Lactobacillus plantarum Genome Diversity by Using Microarrays

Comparative genomics of Lactobacillus

Genome Sequence of the Naturally Plasmid-Free Lactobacillus plantarum Strain NC8 (CCUG 61730)

Genome sequence of Lactobacillus pentosus KCA1: vaginal isolate from a healthy premenopausal woman

The Highly Autoaggregative and Adhesive Phenotype of the Vaginal Lactobacillus plantarum Strain CMPG5300 Is Sortase Dependent

Complete Genome Sequence of Lactococcus lactis subsp. lactis KF147, a Plant-Associated Lactic Acid Bacterium

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