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CRISPR/Cpf1 enables fast and simple genome editing of Saccharomyces cerevisiae

Yeast (Chichester, England), 2018-02, Vol.35 (2), p.201-211

2018

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Multiplex genome editing of microorganisms using CRISPR-Cas

FEMS microbiology letters, 2019-04, Vol.366 (8), p.1

2019

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Carboxylic acid reductase-dependent biosynthesis of eugenol and related allylphenols

Microbial cell factories, 2023-11, Vol.22 (1), p.1-238, Article 238

2023

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Metabolic enzyme clustering by coiled coils improves the biosynthesis of resveratrol and mevalonate

AMB Express, 2020-05, Vol.10 (1), p.97-97, Article 97

2020

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Exploring sequence characteristics related to high-level production of secreted proteins in Aspergillus niger

PloS one, 2012-10, Vol.7 (10), p.e45869-e45869

2012

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Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate

Nucleic acids research, 2015-03, Vol.43 (6), p.3022

2015

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Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor

Nucleic acids research, 2015-12, Vol.43 (21), p.10560

2015

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A Minimal Model of Ribosome Allocation Dynamics Captures Trade-offs in Expression between Endogenous and Synthetic Genes

ACS synthetic biology, 2016-07, Vol.5 (7), p.710-720

2016

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Iterative algorithm-guided design of massive strain libraries, applied to itaconic acid production in yeast

Metabolic engineering, 2018-07, Vol.48, p.33-43

2018

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Identification of InuR, a new Zn(II)2Cys6 transcriptional activator involved in the regulation of inulinolytic genes in Aspergillus niger

Molecular genetics and genomics : MGG, 2008-01, Vol.279 (1), p.11-26

2008

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Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability

Nucleic acids research, 2013-09, Vol.41 (17), p.8021

2013

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Design of Four Small-Molecule-Inducible Systems in the Yeast Chromosome, Applied to Optimize Terpene Biosynthesis

ACS synthetic biology, 2023-04, Vol.12 (4), p.1119-1132

2023

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CRISPR/Cas12a Multiplex Genome Editing of Saccharomyces cerevisiae and the Creation of Yeast Pixel Art

Journal of visualized experiments, 2019-05 (147)

2019

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Novel sequencing technologies to support industrial biotechnology

FEMS microbiology letters, 2018-08, Vol.365 (16), p.1

2018

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SPiCE: a web-based tool for sequence-based protein classification and exploration

BMC bioinformatics, 2014-03, Vol.15 (1), p.93-93, Article 93

2014

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Using Synthetic Biological Parts and Microbioreactors to Explore the Protein Expression Characteristics of Escherichia coli

ACS synthetic biology, 2014-03, Vol.3 (3), p.129-139

2014

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Protein redesign by learning from data

Protein engineering, design and selection, 2014-09, Vol.27 (9), p.281-288

2014

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The decarboxylation of the weak-acid preservative, sorbic acid, is encoded by linked genes in Aspergillus spp

Fungal genetics and biology, 2010-08, Vol.47 (8), p.683-692

2010

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Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics

Fungal genetics and biology, 2009-03, Vol.46 (1), p.S141-S152

2009

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Clavulanic Acid Degradation in Streptomyces clavuligerus Fed-Batch Cultivations

Biotechnology progress, 2002, Vol.18 (3), p.451-457

2002

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Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

Nature biotechnology, 2008-10, Vol.26 (10), p.1161-1168

2008

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A Quantitative Approach to Characterizing Cell Lysis Caused by Mechanical Agitation of Streptomyces clavuligerus

Biotechnology progress, 2001, Vol.17 (2), p.336-347

2001

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Learning fuzzy classification rules from labeled data

Information sciences, 2003-03, Vol.150 (1), p.77-93

2003

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Data-driven generation of compact, accurate, and linguistically sound fuzzy classifiers based on a decision-tree initialization

International journal of approximate reasoning, 2003, Vol.32 (1), p.1-21

2003

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Errata on "GA-fuzzy modeling and classification: complexity and performance" and "Compact and transparent fuzzy models and classifiers through iterative complexity reduction"

IEEE transactions on fuzzy systems, 2003-02, Vol.11 (1), p.151-151

2003

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CRISPR/Cpf1 enables fast and simple genome editing of Saccharomyces cerevisiae

Multiplex genome editing of microorganisms using CRISPR-Cas

Carboxylic acid reductase-dependent biosynthesis of eugenol and related allylphenols

Metabolic enzyme clustering by coiled coils improves the biosynthesis of resveratrol and mevalonate

Exploring sequence characteristics related to high-level production of secreted proteins in Aspergillus niger

Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate

Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor

A Minimal Model of Ribosome Allocation Dynamics Captures Trade-offs in Expression between Endogenous and Synthetic Genes

Iterative algorithm-guided design of massive strain libraries, applied to itaconic acid production in yeast

Identification of InuR, a new Zn(II)2Cys6 transcriptional activator involved in the regulation of inulinolytic genes in Aspergillus niger

Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability

Design of Four Small-Molecule-Inducible Systems in the Yeast Chromosome, Applied to Optimize Terpene Biosynthesis

CRISPR/Cas12a Multiplex Genome Editing of Saccharomyces cerevisiae and the Creation of Yeast Pixel Art

Novel sequencing technologies to support industrial biotechnology

SPiCE: a web-based tool for sequence-based protein classification and exploration

Using Synthetic Biological Parts and Microbioreactors to Explore the Protein Expression Characteristics of Escherichia coli

Protein redesign by learning from data

The decarboxylation of the weak-acid preservative, sorbic acid, is encoded by linked genes in Aspergillus spp

Effective lead selection for improved protein production in Aspergillus niger based on integrated genomics

Clavulanic Acid Degradation in Streptomyces clavuligerus Fed-Batch Cultivations

Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum

A Quantitative Approach to Characterizing Cell Lysis Caused by Mechanical Agitation of Streptomyces clavuligerus

Learning fuzzy classification rules from labeled data

Data-driven generation of compact, accurate, and linguistically sound fuzzy classifiers based on a decision-tree initialization

Errata on "GA-fuzzy modeling and classification: complexity and performance" and "Compact and transparent fuzzy models and classifiers through iterative complexity reduction"

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