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A quantitative atlas of polyadenylation in five mammals

Genome research, 2012-06, Vol.22 (6), p.1173-1183

2012

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Definition, conservation and epigenetics of housekeeping and tissue-enriched genes

BMC genomics, 2009-06, Vol.10 (269), p.269-269

2009

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Digital genome-wide ncRNA expression, including SnoRNAs, across 11 human tissues using polyA-neutral amplification

PloS one, 2010-07, Vol.5 (7), p.e11779-e11779

2010

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Digital transcriptome profiling using selective hexamer priming for cDNA synthesis

Nature methods, 2009-09, Vol.6 (9), p.647-649

2009

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Physically Realistic Homology Models Built with ROSETTA Can Be More Accurate than Their Templates

Proceedings of the National Academy of Sciences - PNAS, 2006-04, Vol.103 (14), p.5361-5366

2006

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De Novo Prediction of Three-dimensional Structures for Major Protein Families

Journal of molecular biology, 2002-09, Vol.322 (1), p.65-78

2002

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Automated prediction of CASP-5 structures using the Robetta server

Proteins, structure, function, and bioinformatics, 2003, Vol.53 (S6), p.524-533

2003

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Prediction of CASP6 structures using automated robetta protocols

Proteins, structure, function, and bioinformatics, 2005, Vol.61 (S7), p.157-166

2005

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DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing

BMC genomics, 2010-04, Vol.11 (1), p.244-244

2010

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Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation

Proteins, structure, function, and bioinformatics, 2003, Vol.53 (S6), p.457-468

2003

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Circular Dichroism Spectra of Short, Fixed-Nucleus Alanine Helices

Proceedings of the National Academy of Sciences - PNAS, 2002-11, Vol.99 (24), p.15416-15421

2002

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Protein Structure Prediction Using Rosetta

Methods in Enzymology, 2004, Vol.383, p.66-93

2004

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Genetic validation of whole-transcriptome sequencing for mapping expression affected by cis-regulatory variation

BMC genomics, 2010-08, Vol.11 (1), p.473-473, Article 473

2010

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Protein–Protein Docking with Simultaneous Optimization of Rigid-body Displacement and Side-chain Conformations

Journal of molecular biology, 2003-08, Vol.331 (1), p.281-299

2003

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Modeling structurally variable regions in homologous proteins with rosetta

Proteins, structure, function, and bioinformatics, 2004-05, Vol.55 (3), p.656-677

2004

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Comparison of NH Exchange and Circular Dichroism as Techniques for Measuring the Parameters of the Helix−Coil Transition in Peptides

Biochemistry (Easton), 1997-07, Vol.36 (28), p.8435-8442

1997

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Solution Structure of the Sodium Channel Inactivation Gate

Biochemistry (Easton), 1999-01, Vol.38 (3), p.855-861

1999

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De Novo Determination of Protein Backbone Structure from Residual Dipolar Couplings Using Rosetta

Journal of the American Chemical Society, 2002-03, Vol.124 (11), p.2723-2729

2002

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Alanine Is Helix-Stabilizing in Both Template-Nucleated and Standard Peptide Helices

Proceedings of the National Academy of Sciences - PNAS, 1999-03, Vol.96 (7), p.3682-3687

1999

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Pokefind: a novel topological filter for use with protein structure prediction

Bioinformatics, 2009-06, Vol.25 (12), p.i281-i288

2009

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An improved protein decoy set for testing energy functions for protein structure prediction

Proteins, structure, function, and bioinformatics, 2003-10, Vol.53 (1), p.76-87

2003

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Rapid knot detection and application to protein structure prediction

Bioinformatics, 2006-07, Vol.22 (14), p.e252-e259

2006

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Protein Structure Estimation from Minimal Restraints Using Rosetta

Methods in Enzymology, 2005, Vol.394, p.244-260

Rohl, Carol A.

2005

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Helix propagation and N‐cap propensities of the amino acids measured in alanine‐based peptides in 40 volume percent trifluoroethanol

Protein science, 1996-12, Vol.5 (12), p.2623-2637

1996

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Mapping the genetic architecture of gene expression in human liver

PLoS biology, 2008-05, Vol.6 (5), p.e107-e107

2008

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A quantitative atlas of polyadenylation in five mammals

Definition, conservation and epigenetics of housekeeping and tissue-enriched genes

Digital genome-wide ncRNA expression, including SnoRNAs, across 11 human tissues using polyA-neutral amplification

Digital transcriptome profiling using selective hexamer priming for cDNA synthesis

Physically Realistic Homology Models Built with ROSETTA Can Be More Accurate than Their Templates

De Novo Prediction of Three-dimensional Structures for Major Protein Families

Automated prediction of CASP-5 structures using the Robetta server

Prediction of CASP6 structures using automated robetta protocols

DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing

Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation

Circular Dichroism Spectra of Short, Fixed-Nucleus Alanine Helices

Protein Structure Prediction Using Rosetta

Genetic validation of whole-transcriptome sequencing for mapping expression affected by cis-regulatory variation

Protein–Protein Docking with Simultaneous Optimization of Rigid-body Displacement and Side-chain Conformations

Modeling structurally variable regions in homologous proteins with rosetta

Comparison of NH Exchange and Circular Dichroism as Techniques for Measuring the Parameters of the Helix−Coil Transition in Peptides

Solution Structure of the Sodium Channel Inactivation Gate

De Novo Determination of Protein Backbone Structure from Residual Dipolar Couplings Using Rosetta

Alanine Is Helix-Stabilizing in Both Template-Nucleated and Standard Peptide Helices

Pokefind: a novel topological filter for use with protein structure prediction

An improved protein decoy set for testing energy functions for protein structure prediction

Rapid knot detection and application to protein structure prediction

Protein Structure Estimation from Minimal Restraints Using Rosetta

Helix propagation and N‐cap propensities of the amino acids measured in alanine‐based peptides in 40 volume percent trifluoroethanol

Mapping the genetic architecture of gene expression in human liver

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