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Mass spectrometry based proteomics, background, status and future needs

Protein & cell, 2012-09, Vol.3 (9), p.641-647

Roepstorff, Peter

2012

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Quantitative Proteomics Using Isobaric Labeling: A Practical Guide

Genomics, proteomics & bioinformatics, 2021-10, Vol.19 (5), p.689-706

2021

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Legume receptors perceive the rhizobial lipochitin oligosaccharide signal molecules by direct binding

Proceedings of the National Academy of Sciences - PNAS, 2012-08, Vol.109 (34), p.13859-13864

2012

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Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Molecular & cellular proteomics, 2005-07, Vol.4 (7), p.873-886

2005

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Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry

Proteomics (Weinheim), 2008-09, Vol.8 (18), p.3833-3847

2008

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The SNO/SOH TMT strategy for combinatorial analysis of reversible cysteine oxidations

Journal of proteomics, 2015-01, Vol.113, p.415-434

2015

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Laccase detoxification mediates the nutritional alliance between leaf-cutting ants and fungus-garden symbionts

Proceedings of the National Academy of Sciences - PNAS, 2013-01, Vol.110 (2), p.583-587

2013

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Identification of Novel Oxidized Protein Substrates and Physiological Partners of the Mitochondrial ATP-dependent Lon-like Protease Pim1

The Journal of biological chemistry, 2010-04, Vol.285 (15), p.11445-11457

2010

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Protein modification and replicative senescence of WI‐38 human embryonic fibroblasts

Aging cell, 2010-04, Vol.9 (2), p.252-272

2010

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Highly Efficient Phosphopeptide Enrichment by Calcium Phosphate Precipitation Combined with Subsequent IMAC Enrichment

Molecular & cellular proteomics, 2007-11, Vol.6 (11), p.2032-2042

2007

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Identification of Protein Degradation during Post-mortem Storage of Pig Meat

Journal of agricultural and food chemistry, 2002-09, Vol.50 (20), p.5508-5512

2002

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Characterization of Gel-separated Glycoproteins Using Two-step Proteolytic Digestion Combined with Sequential Microcolumns and Mass Spectrometry

Molecular & cellular proteomics, 2005-02, Vol.4 (2), p.107-119

2005

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Phosphoproteomic Analysis of Rat Neutrophils Shows the Effect of Intestinal Ischemia/Reperfusion and Preconditioning on Kinases and Phosphatases

International journal of molecular sciences, 2020-08, Vol.21 (16), p.5799

2020

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Intramolecular Migration of Amide Hydrogens in Protonated Peptides upon Collisional Activation

Journal of the American Chemical Society, 2005-03, Vol.127 (8), p.2785-2793

2005

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Combination of two matrices results in improved performance of maldi ms for peptide mass mapping and protein analysis

Journal of the American Society for Mass Spectrometry, 2003-09, Vol.14 (9), p.992-1002

2003

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Mass spectrometry in protein studies from genome to function

Current opinion in biotechnology, 1997-02, Vol.8 (1), p.6-13

Roepstorff, Peter

1997

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Exoproteome profiling of Trypanosoma cruzi during amastigogenesis early stages

PloS one, 2019-11, Vol.14 (11), p.e0225386-e0225386

2019

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Proteome Profiling of Populus euphratica Oliv. Upon Heat Stress

Annals of botany, 2006-08, Vol.98 (2), p.361-377

2006

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Shootin1: a protein involved in the organization of an asymmetric signal for neuronal polarization

The Journal of cell biology, 2006-10, Vol.175 (1), p.147-157

2006

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Leaf-cutting ant fungi produce cell wall degrading pectinase complexes reminiscent of phytopathogenic fungi

BMC biology, 2010-12, Vol.8 (156), p.156-156, Article 156

2010

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Nanodisc-based Co-immunoprecipitation for Mass Spectrometric Identification of Membrane-interacting Proteins

Molecular & cellular proteomics, 2011-07, Vol.10 (7), p.O110.006775, Article O110.006775

2011

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The molecular basis for oat intolerance in patients with celiac disease

PLoS medicine, 2004-10, Vol.1 (1), p.e1-e1

2004

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Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

The Plant cell, 2002-01, Vol.14 (1), p.211-236

2002

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Combined N‑Glycome and N‑Glycoproteome Analysis of the Lotus japonicus Seed Globulin Fraction Shows Conservation of Protein Structure and Glycosylation in Legumes

Journal of proteome research, 2013-07, Vol.12 (7), p.3383-3392

2013

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Sample purification and preparation technique based on nano-scale reversed-phase columns for the sensitive analysis of complex peptide mixtures by matrix-assisted laser desorption/ionization mass spectrometry

Journal of mass spectrometry., 1999-02, Vol.34 (2), p.105-116

1999

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Mass spectrometry based proteomics, background, status and future needs

Quantitative Proteomics Using Isobaric Labeling: A Practical Guide

Legume receptors perceive the rhizobial lipochitin oligosaccharide signal molecules by direct binding

Highly Selective Enrichment of Phosphorylated Peptides from Peptide Mixtures Using Titanium Dioxide Microcolumns

Identification of N-linked glycoproteins in human milk by hydrophilic interaction liquid chromatography and mass spectrometry

The SNO/SOH TMT strategy for combinatorial analysis of reversible cysteine oxidations

Laccase detoxification mediates the nutritional alliance between leaf-cutting ants and fungus-garden symbionts

Identification of Novel Oxidized Protein Substrates and Physiological Partners of the Mitochondrial ATP-dependent Lon-like Protease Pim1

Protein modification and replicative senescence of WI‐38 human embryonic fibroblasts

Highly Efficient Phosphopeptide Enrichment by Calcium Phosphate Precipitation Combined with Subsequent IMAC Enrichment

Identification of Protein Degradation during Post-mortem Storage of Pig Meat

Characterization of Gel-separated Glycoproteins Using Two-step Proteolytic Digestion Combined with Sequential Microcolumns and Mass Spectrometry

Phosphoproteomic Analysis of Rat Neutrophils Shows the Effect of Intestinal Ischemia/Reperfusion and Preconditioning on Kinases and Phosphatases

Intramolecular Migration of Amide Hydrogens in Protonated Peptides upon Collisional Activation

Combination of two matrices results in improved performance of maldi ms for peptide mass mapping and protein analysis

Mass spectrometry in protein studies from genome to function

Exoproteome profiling of Trypanosoma cruzi during amastigogenesis early stages

Proteome Profiling of Populus euphratica Oliv. Upon Heat Stress

Shootin1: a protein involved in the organization of an asymmetric signal for neuronal polarization

Leaf-cutting ant fungi produce cell wall degrading pectinase complexes reminiscent of phytopathogenic fungi

Nanodisc-based Co-immunoprecipitation for Mass Spectrometric Identification of Membrane-interacting Proteins

The molecular basis for oat intolerance in patients with celiac disease

Central Functions of the Lumenal and Peripheral Thylakoid Proteome of Arabidopsis Determined by Experimentation and Genome-Wide Prediction

Combined N‑Glycome and N‑Glycoproteome Analysis of the Lotus japonicus Seed Globulin Fraction Shows Conservation of Protein Structure and Glycosylation in Legumes

Sample purification and preparation technique based on nano-scale reversed-phase columns for the sensitive analysis of complex peptide mixtures by matrix-assisted laser desorption/ionization mass spectrometry

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