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Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions

BMC bioinformatics, 2018-04, Vol.19 (1), p.134-8, Article 134

2018

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Gene expression profiling of B lymphocytes and plasma cells from Waldenström's macroglobulinemia: comparison with expression patterns of the same cell counterparts from chronic lymphocytic leukemia, multiple myeloma and normal individuals

Leukemia, 2007-03, Vol.21 (3), p.541-549

2007

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miRNA cargo within exosome-like vesicle transfer influences metastatic bone colonization

Molecular oncology, 2014-05, Vol.8 (3), p.689-703

2014

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Computational approaches in cancer multidrug resistance research: Identification of potential biomarkers, drug targets and drug-target interactions

Drug resistance updates, 2020-01, Vol.48, p.100662-100662, Article 100662

2020

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Deregulation of microRNA expression in the different genetic subtypes of multiple myeloma and correlation with gene expression profiling

Leukemia, 2010-03, Vol.24 (3), p.629-637

2010

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DECO: decompose heterogeneous population cohorts for patient stratification and discovery of sample biomarkers using omic data profiling

Bioinformatics, 2019-10, Vol.35 (19), p.3651-3662

2019

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A gene signature of bone metastatic colonization sensitizes for tumor-induced osteolysis and predicts survival in lung cancer

Oncogene, 2014-10, Vol.33 (43), p.5090-5099

2014

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Transcriptional networks of knockout cell lines identify functional specificities of H-Ras and N-Ras: significant involvement of N-Ras in biotic and defense responses

Oncogene, 2007-02, Vol.26 (6), p.917-933

2007

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Genome-wide profiling of methylation identifies novel targets with aberrant hypermethylation and reduced expression in low-risk myelodysplastic syndromes

Leukemia, 2013-03, Vol.27 (3), p.610-618

2013

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JAMI: a Java library for molecular interactions and data interoperability

BMC bioinformatics, 2018-04, Vol.19 (1), p.133-133, Article 133

2018

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Interleukin-12 inhibits liver-specific drug-inducible systems in vivo

Gene therapy, 2008-02, Vol.15 (4), p.277-288

2008

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Identification of a novel recurrent gain on 20q13 in chronic lymphocytic leukemia by array CGH and gene expression profiling

Annals of oncology, 2012-08, Vol.23 (8), p.2138-2146

2012

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Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes

Bioinformatics, 2006-05, Vol.22 (9), p.1103-1110

2006

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Mobilisation with G-CSF in healthy donors promotes a high but temporal deregulation of genes

Leukemia, 2005-06, Vol.19 (6), p.1088-1091

2005

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MicroRNA (miR)‐203 and miR‐205 expression patterns identify subgroups of prognosis in cutaneous squamous cell carcinoma

British journal of dermatology (1951), 2017-07, Vol.177 (1), p.168-178

2017

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Analysis of the structure of the PsbO protein and its implications. [Erratum: 2004, v. 82, no. 2, p. 199, 329-343.]

Photosynthesis research, 2004-01, Vol.81 (3), p.329-343

2004

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Structural domain-domain interactions: Assessment and comparison with protein-protein interaction data to improve the interactome

Proteins, structure, function, and bioinformatics, 2010-01, Vol.78 (1), p.109-117

2010

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Segmentation of genomic and transcriptomic microarrays data reveals major correlation between DNA copy number aberrations and gene–loci expression

Genomics (San Diego, Calif.), 2011-02, Vol.97 (2), p.86-93

2011

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Bioinformatics training: a review of challenges, actions and support requirements

Briefings in bioinformatics, 2010-11, Vol.11 (6), p.544-551

2010

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Responses of Sugar Beet Roots to Iron Deficiency. Changes in Carbon Assimilation and Oxygen Use

Plant physiology (Bethesda), 2000-10, Vol.124 (2), p.885-897

2000

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Laser microdissection and microarray analysis of the hippocampus of Ras-GRF1 knockout mice reveals gene expression changes affecting signal transduction pathways related to memory and learning

Neuroscience, 2007-04, Vol.146 (1), p.272-285

2007

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APID: Agile Protein Interaction DataAnalyzer

Nucleic acids research, 2006-07, Vol.34 (Web Server issue), p.W298-W302

2006

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Comparison of primary charge separation in the photosystem II reaction center complex isolated from wild-type and D1-130 mutants of the cyanobacterium Synechocystis PCC 6803

The Journal of biological chemistry, 1996-01, Vol.271 (4), p.2093-2101

1996

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Cancer-associated fibroblast-derived gene signatures determine prognosis in colon cancer patients

Molecular cancer, 2021-04, Vol.20 (1), p.73-73, Article 73

2021

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β-Carotene within the isolated Photosystem II reaction centre: photooxidation and irreversible bleaching of this chromophore by oxidised P680

Biochimica et biophysica acta. Bioenergetics, 1991-09, Vol.1060 (1), p.106-114

1991

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Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions

Gene expression profiling of B lymphocytes and plasma cells from Waldenström's macroglobulinemia: comparison with expression patterns of the same cell counterparts from chronic lymphocytic leukemia, multiple myeloma and normal individuals

miRNA cargo within exosome-like vesicle transfer influences metastatic bone colonization

Computational approaches in cancer multidrug resistance research: Identification of potential biomarkers, drug targets and drug-target interactions

Deregulation of microRNA expression in the different genetic subtypes of multiple myeloma and correlation with gene expression profiling

DECO: decompose heterogeneous population cohorts for patient stratification and discovery of sample biomarkers using omic data profiling

A gene signature of bone metastatic colonization sensitizes for tumor-induced osteolysis and predicts survival in lung cancer

Transcriptional networks of knockout cell lines identify functional specificities of H-Ras and N-Ras: significant involvement of N-Ras in biotic and defense responses

Genome-wide profiling of methylation identifies novel targets with aberrant hypermethylation and reduced expression in low-risk myelodysplastic syndromes

JAMI: a Java library for molecular interactions and data interoperability

Interleukin-12 inhibits liver-specific drug-inducible systems in vivo

Identification of a novel recurrent gain on 20q13 in chronic lymphocytic leukemia by array CGH and gene expression profiling

Algorithm to find gene expression profiles of deregulation and identify families of disease-altered genes

Mobilisation with G-CSF in healthy donors promotes a high but temporal deregulation of genes

MicroRNA (miR)‐203 and miR‐205 expression patterns identify subgroups of prognosis in cutaneous squamous cell carcinoma

Analysis of the structure of the PsbO protein and its implications. [Erratum: 2004, v. 82, no. 2, p. 199, 329-343.]

Structural domain-domain interactions: Assessment and comparison with protein-protein interaction data to improve the interactome

Segmentation of genomic and transcriptomic microarrays data reveals major correlation between DNA copy number aberrations and gene–loci expression

Bioinformatics training: a review of challenges, actions and support requirements

Responses of Sugar Beet Roots to Iron Deficiency. Changes in Carbon Assimilation and Oxygen Use

Laser microdissection and microarray analysis of the hippocampus of Ras-GRF1 knockout mice reveals gene expression changes affecting signal transduction pathways related to memory and learning

APID: Agile Protein Interaction DataAnalyzer

Comparison of primary charge separation in the photosystem II reaction center complex isolated from wild-type and D1-130 mutants of the cyanobacterium Synechocystis PCC 6803

Cancer-associated fibroblast-derived gene signatures determine prognosis in colon cancer patients

β-Carotene within the isolated Photosystem II reaction centre: photooxidation and irreversible bleaching of this chromophore by oxidised P680

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