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Mass bias evolution in tSZ cluster cosmology

Astronomy and astrophysics (Berlin), 2019, Vol.626, p.A27

2019

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Integrating protein localization with automated signaling pathway reconstruction

BMC bioinformatics, 2019-12, Vol.20 (Suppl 16), p.505-505, Article 505

2019

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MsPAC: a tool for haplotype-phased structural variant detection

Bioinformatics, 2020-02, Vol.36 (3), p.922-924

2020

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Hypergraph-based connectivity measures for signaling pathway topologies

PLoS computational biology, 2019-10, Vol.15 (10), p.e1007384-e1007384

2019

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Ten simple rules for attending your first conference

PLoS computational biology, 2021-07, Vol.17 (7), p.e1009133-e1009133

2021

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Network-based prediction of polygenic disease genes involved in cell motility

BMC bioinformatics, 2019-06, Vol.20 (Suppl 12), p.313-313, Article 313

2019

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Reconstructing cancer genomes from paired-end sequencing data

BMC bioinformatics, 2012-04, Vol.13 Suppl 6 (Suppl 6), p.S10-S10, Article S10

2012

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Gremlin: An Interactive Visualization Model for Analyzing Genomic Rearrangements

IEEE transactions on visualization and computer graphics, 2010-11, Vol.16 (6), p.918-926

2010

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From network analysis to experimental validation: identification of regulators of non-muscle myosin II contractility using the folded-gastrulation signaling pathway

BMC molecular and cell biology, 2023-10, Vol.24 (1), p.32-32, Article 32

2023

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A New Approach for Quantitative Phosphoproteomic Dissection of Signaling Pathways Applied to T Cell Receptor Activation

Molecular & cellular proteomics, 2009-11, Vol.8 (11), p.2418-2431

2009

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Quantitative phosphoproteomics reveals SLP-76 dependent regulation of PAG and Src family kinases in T cells

PloS one, 2012-10, Vol.7 (10), p.e46725

2012

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Quantitative Time-Resolved Phosphoproteomic Analysis of Mast Cell Signaling

The Journal of immunology (1950), 2007-11, Vol.179 (9), p.5864-5876

2007

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Distance measures for tumor evolutionary trees

Bioinformatics, 2020-04, Vol.36 (7), p.2090-2097

2020

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Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma

Cell reports. Medicine, 2021-05, Vol.2 (5), p.100267-100267, Article 100267

2021

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Detection of recurrent rearrangement breakpoints from copy number data

BMC bioinformatics, 2011-04, Vol.12 (1), p.114-114, Article 114

2011

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Growing Directed Acyclic Graphs: Optimization Functions for Pathway Reconstruction Algorithms

Journal of computational biology, 2023-07, Vol.30 (7), p.814-828

2023

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Integrated genomics of ovarian xenograft tumor progression and chemotherapy response

BMC cancer, 2011-07, Vol.11 (1), p.308-308, Article 308

2011

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Special Issue Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022)

Journal of computational biology, 2023-07, Vol.30 (7), p.737-737

2023

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Identification of disease modules using higher-order network structure

Bioinformatics advances, 2023-01, Vol.3 (1), p.vbad140-vbad140

2023

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Reconciling Signaling Pathway Databases with Network Topologies

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 2022, Vol.27, p.211

2022

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Characterization of structural variants with single molecule and hybrid sequencing approaches

Bioinformatics (Oxford, England), 2014-12, Vol.30 (24), p.3458-3466

2014

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Graphery : interactive tutorials for biological network algorithms

Nucleic acids research, 2021-07, Vol.49 (W1), p.W257-W262

2021

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Transformer Neural Networks for Protein Family and Interaction Prediction Tasks

Journal of computational biology, 2023-01, Vol.30 (1), p.95-111

2023

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Pathway Analysis with Signaling Hypergraphs

IEEE/ACM transactions on computational biology and bioinformatics, 2017-09, Vol.14 (5), p.1042-1055

2017

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Posttraumatic stress disorder symptomology as measured by PCL‐5 and its relationships to resilience, hostility and stress among paramedics and social professionals

Stress and health, 2024-10, Vol.40 (5), p.e3409-n/a

2024

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Mass bias evolution in tSZ cluster cosmology

Integrating protein localization with automated signaling pathway reconstruction

MsPAC: a tool for haplotype-phased structural variant detection

Hypergraph-based connectivity measures for signaling pathway topologies

Ten simple rules for attending your first conference

Network-based prediction of polygenic disease genes involved in cell motility

Reconstructing cancer genomes from paired-end sequencing data

Gremlin: An Interactive Visualization Model for Analyzing Genomic Rearrangements

From network analysis to experimental validation: identification of regulators of non-muscle myosin II contractility using the folded-gastrulation signaling pathway

A New Approach for Quantitative Phosphoproteomic Dissection of Signaling Pathways Applied to T Cell Receptor Activation

Quantitative phosphoproteomics reveals SLP-76 dependent regulation of PAG and Src family kinases in T cells

Quantitative Time-Resolved Phosphoproteomic Analysis of Mast Cell Signaling

Distance measures for tumor evolutionary trees

Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma

Detection of recurrent rearrangement breakpoints from copy number data

Growing Directed Acyclic Graphs: Optimization Functions for Pathway Reconstruction Algorithms

Integrated genomics of ovarian xenograft tumor progression and chemotherapy response

Special Issue Computational Network Biology: Modeling, Analysis, and Control (CNB-MAC) Workshop (2022)

Identification of disease modules using higher-order network structure

Reconciling Signaling Pathway Databases with Network Topologies

Characterization of structural variants with single molecule and hybrid sequencing approaches

Graphery : interactive tutorials for biological network algorithms

Transformer Neural Networks for Protein Family and Interaction Prediction Tasks

Pathway Analysis with Signaling Hypergraphs

Posttraumatic stress disorder symptomology as measured by PCL‐5 and its relationships to resilience, hostility and stress among paramedics and social professionals

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